Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0510
(380 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37139-1|CAA85491.1| 485|Caenorhabditis elegans Hypothetical pr... 46 7e-06
U95074-1|AAB94647.1| 485|Caenorhabditis elegans protein disulph... 46 7e-06
Z92970-1|CAB07480.1| 488|Caenorhabditis elegans Hypothetical pr... 45 2e-05
AB072567-1|BAB88817.1| 488|Caenorhabditis elegans ceERp57 protein. 45 2e-05
AC006834-9|AAL11490.1| 447|Caenorhabditis elegans Hypothetical ... 39 0.001
U41542-8|AAN39682.1| 437|Caenorhabditis elegans Protein disulfi... 36 0.013
U41542-7|ABO16445.1| 371|Caenorhabditis elegans Protein disulfi... 36 0.013
U41542-6|AAK39152.1| 493|Caenorhabditis elegans Protein disulfi... 36 0.013
L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical pr... 36 0.013
Z98866-5|CAB11548.1| 436|Caenorhabditis elegans Hypothetical pr... 35 0.023
U80848-2|AAB37989.1| 574|Caenorhabditis elegans Hypothetical pr... 34 0.040
AL032657-16|CAJ85780.1| 318|Caenorhabditis elegans Hypothetical... 34 0.040
AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical... 34 0.040
AC084197-8|AAG23476.1| 228|Caenorhabditis elegans Hypothetical ... 33 0.069
U40411-4|AAC47065.1| 440|Caenorhabditis elegans Temporarily ass... 32 0.12
Z69637-1|CAA93467.1| 601|Caenorhabditis elegans Hypothetical pr... 31 0.21
U39646-7|AAA80371.1| 623|Caenorhabditis elegans Hypothetical pr... 28 2.0
U39646-6|AAK72058.1| 624|Caenorhabditis elegans Hypothetical pr... 28 2.0
U39646-5|AAK72057.1| 678|Caenorhabditis elegans Hypothetical pr... 28 2.0
U23168-7|AAC38808.1| 115|Caenorhabditis elegans Hypothetical pr... 28 2.6
DQ241299-1|ABB45863.1| 115|Caenorhabditis elegans TRX-1a protein. 28 2.6
U97402-2|AAB63409.2| 393|Caenorhabditis elegans Hypothetical pr... 27 3.4
U97402-1|ABB51193.1| 393|Caenorhabditis elegans Hypothetical pr... 27 3.4
AF047657-6|AAK18946.1| 337|Caenorhabditis elegans Serpentine re... 27 4.5
U23168-6|AAP86623.1| 114|Caenorhabditis elegans Hypothetical pr... 27 6.0
DQ241300-1|ABB45864.1| 114|Caenorhabditis elegans TRX-1b protein. 27 6.0
AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical ... 27 6.0
>Z37139-1|CAA85491.1| 485|Caenorhabditis elegans Hypothetical
protein C14B1.1 protein.
Length = 485
Score = 46.4 bits (105), Expect = 7e-06
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +3
Query: 231 SNF-KFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAE 341
SNF + ++E F+ FY+PWC HC P+W ELAE
Sbjct: 371 SNFNEIALDETKTVFVKFYAPWCGHCKQLVPVWDELAE 408
Score = 41.5 bits (93), Expect = 2e-04
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +3
Query: 192 VAPEQSSVY*YNPSNFKFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAELVNTKDSKFA 371
V + +V SNF+ I + + FY+PWC HC P + E A+L+ + S
Sbjct: 18 VVADSENVLVLTESNFEETINGNEFVLVKFYAPWCVHCKSLAPKYDEAADLLKEEGSDIK 77
Query: 372 IAQ 380
+A+
Sbjct: 78 LAK 80
>U95074-1|AAB94647.1| 485|Caenorhabditis elegans protein disulphide
isomerase isoformI protein.
Length = 485
Score = 46.4 bits (105), Expect = 7e-06
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +3
Query: 231 SNF-KFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAE 341
SNF + ++E F+ FY+PWC HC P+W ELAE
Sbjct: 371 SNFNEIALDETKTVFVKFYAPWCGHCKQLVPVWDELAE 408
Score = 41.5 bits (93), Expect = 2e-04
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +3
Query: 192 VAPEQSSVY*YNPSNFKFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAELVNTKDSKFA 371
V + +V SNF+ I + + FY+PWC HC P + E A+L+ + S
Sbjct: 18 VVADSENVLVLTESNFEETINGNEFVLVKFYAPWCVHCKSLAPKYDEAADLLKEEGSDIK 77
Query: 372 IAQ 380
+A+
Sbjct: 78 LAK 80
>Z92970-1|CAB07480.1| 488|Caenorhabditis elegans Hypothetical
protein H06O01.1 protein.
Length = 488
Score = 45.2 bits (102), Expect = 2e-05
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +3
Query: 156 NILPYLFVFPYLVAPEQSSVY*YNPSNFKFQIEEMDGNFIM-FYSPWCXHCT*FYPIWSE 332
N PY+ P + EQ V NFK I + D + ++ FY+PWC HC P + E
Sbjct: 347 NAEPYMKSEP--IPDEQGDVKVAVGKNFKELIMDADKDVLIEFYAPWCGHCKSLAPKYEE 404
Query: 333 LAELVNTKD 359
LAE +N +D
Sbjct: 405 LAEKLNKED 413
Score = 37.5 bits (83), Expect = 0.003
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +3
Query: 222 YNPSNFKFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAELVNTKDSKFAIAQ 380
Y NF I+ D + FY+PWC HC P + A + + D A+ +
Sbjct: 25 YTDGNFDDLIQTHDIALVKFYAPWCGHCKKIAPEYERAAPKLASNDPPVALVK 77
>AB072567-1|BAB88817.1| 488|Caenorhabditis elegans ceERp57 protein.
Length = 488
Score = 45.2 bits (102), Expect = 2e-05
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +3
Query: 156 NILPYLFVFPYLVAPEQSSVY*YNPSNFKFQIEEMDGNFIM-FYSPWCXHCT*FYPIWSE 332
N PY+ P + EQ V NFK I + D + ++ FY+PWC HC P + E
Sbjct: 347 NAEPYMKSEP--IPDEQGDVKVAVGKNFKELIMDADKDVLIEFYAPWCGHCKSLAPKYEE 404
Query: 333 LAELVNTKD 359
LAE +N +D
Sbjct: 405 LAEKLNKED 413
Score = 37.5 bits (83), Expect = 0.003
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +3
Query: 222 YNPSNFKFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAELVNTKDSKFAIAQ 380
Y NF I+ D + FY+PWC HC P + A + + D A+ +
Sbjct: 25 YTDGNFDDLIQTHDIALVKFYAPWCGHCKKIAPEYERAAPKLASNDPPVALVK 77
>AC006834-9|AAL11490.1| 447|Caenorhabditis elegans Hypothetical
protein ZK973.11 protein.
Length = 447
Score = 38.7 bits (86), Expect = 0.001
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +3
Query: 270 FIMFYSPWCXHCT*FYPIWSELAELVN 350
F+ FY+PWC HC +P+W ++ ++
Sbjct: 47 FVEFYAPWCAHCKRLHPVWDQVGHTLS 73
>U41542-8|AAN39682.1| 437|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform b protein.
Length = 437
Score = 35.5 bits (78), Expect = 0.013
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 273 IMFYSPWCXHCT*FYPIWSELAE 341
+ FY+PWC HC P W +L E
Sbjct: 330 VEFYAPWCGHCKQLAPTWDKLGE 352
Score = 33.5 bits (73), Expect = 0.052
Identities = 16/63 (25%), Positives = 28/63 (44%)
Frame = +3
Query: 192 VAPEQSSVY*YNPSNFKFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAELVNTKDSKFA 371
V E+ +V NF I + + FY+PWC HC P +++ A + + S
Sbjct: 18 VIEEEENVIVLTKDNFDEVINGNEFILVEFYAPWCGHCKSLAPEYAKAATQLKEEGSDIK 77
Query: 372 IAQ 380
+ +
Sbjct: 78 LGK 80
>U41542-7|ABO16445.1| 371|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform c protein.
Length = 371
Score = 35.5 bits (78), Expect = 0.013
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 273 IMFYSPWCXHCT*FYPIWSELAE 341
+ FY+PWC HC P W +L E
Sbjct: 264 VEFYAPWCGHCKQLAPTWDKLGE 286
Score = 33.5 bits (73), Expect = 0.052
Identities = 16/63 (25%), Positives = 28/63 (44%)
Frame = +3
Query: 192 VAPEQSSVY*YNPSNFKFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAELVNTKDSKFA 371
V E+ +V NF I + + FY+PWC HC P +++ A + + S
Sbjct: 18 VIEEEENVIVLTKDNFDEVINGNEFILVEFYAPWCGHCKSLAPEYAKAATQLKEEGSDIK 77
Query: 372 IAQ 380
+ +
Sbjct: 78 LGK 80
>U41542-6|AAK39152.1| 493|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform a protein.
Length = 493
Score = 35.5 bits (78), Expect = 0.013
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 273 IMFYSPWCXHCT*FYPIWSELAE 341
+ FY+PWC HC P W +L E
Sbjct: 386 VEFYAPWCGHCKQLAPTWDKLGE 408
Score = 33.5 bits (73), Expect = 0.052
Identities = 16/63 (25%), Positives = 28/63 (44%)
Frame = +3
Query: 192 VAPEQSSVY*YNPSNFKFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAELVNTKDSKFA 371
V E+ +V NF I + + FY+PWC HC P +++ A + + S
Sbjct: 18 VIEEEENVIVLTKDNFDEVINGNEFILVEFYAPWCGHCKSLAPEYAKAATQLKEEGSDIK 77
Query: 372 IAQ 380
+ +
Sbjct: 78 LGK 80
>L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical
protein C14B9.2 protein.
Length = 618
Score = 35.5 bits (78), Expect = 0.013
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 231 SNF-KFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAELVNTKDSKFAIAQ 380
SNF K +E I FY+PWC HC F + ELA+ + +A+
Sbjct: 507 SNFDKIVNDESKDVLIEFYAPWCGHCKSFESKYVELAQALKKTQPNVVLAK 557
Score = 34.7 bits (76), Expect = 0.023
Identities = 16/61 (26%), Positives = 26/61 (42%)
Frame = +3
Query: 198 PEQSSVY*YNPSNFKFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAELVNTKDSKFAIA 377
P V NF I + + FY+PWC HC P + + A+ + + SK +
Sbjct: 144 PPPEEVVTLTTENFDDFISNNELVLVEFYAPWCGHCKKLAPEYEKAAQKLKAQGSKVKLG 203
Query: 378 Q 380
+
Sbjct: 204 K 204
Score = 30.7 bits (66), Expect = 0.37
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +3
Query: 234 NFKFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAELVN 350
NF +++ + FY+PWC HC P + + + V+
Sbjct: 45 NFDAFLKKNPSVLVKFYAPWCGHCKHLAPEYEKASSKVS 83
>Z98866-5|CAB11548.1| 436|Caenorhabditis elegans Hypothetical
protein Y49E10.4 protein.
Length = 436
Score = 34.7 bits (76), Expect = 0.023
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 231 SNF-KFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAE 341
SNF K + + + F++PWC HC P W + AE
Sbjct: 162 SNFDKLVLNSKEPWMVEFFAPWCGHCQKLEPEWKKAAE 199
Score = 33.9 bits (74), Expect = 0.040
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +3
Query: 204 QSSVY*YNPSNFKFQIEEMDGNFIM-FYSPWCXHCT*FYPIWSELAELV 347
+ SV+ SNF ++ + D +I+ FY+P+C HC P + + A+L+
Sbjct: 23 KDSVFELTDSNFDAKVLKSDRIWIVEFYAPYCGHCKSLVPEYKKAAKLL 71
>U80848-2|AAB37989.1| 574|Caenorhabditis elegans Hypothetical
protein T10H10.2 protein.
Length = 574
Score = 33.9 bits (74), Expect = 0.040
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 264 GNFIMFYSPWCXHCT*FYPIWSELAELVN 350
G + FYS WC HC F P + LA+ V+
Sbjct: 57 GYLVEFYSDWCGHCRAFAPTYKNLAKDVD 85
>AL032657-16|CAJ85780.1| 318|Caenorhabditis elegans Hypothetical
protein Y47H9C.5b protein.
Length = 318
Score = 33.9 bits (74), Expect = 0.040
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 279 FYSPWCXHCT*FYPIWSELAE 341
F++PWC HC F PI+ ++A+
Sbjct: 224 FFAPWCGHCIQFAPIYDQIAK 244
>AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical
protein Y47H9C.5a protein.
Length = 788
Score = 33.9 bits (74), Expect = 0.040
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 279 FYSPWCXHCT*FYPIWSELAE 341
F++PWC HC F PI+ ++A+
Sbjct: 694 FFAPWCGHCIQFAPIYDQIAK 714
Score = 29.9 bits (64), Expect = 0.64
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 270 FIMFYSPWCXHCT*FYPIWSELA 338
FI FYS +C HC P W + A
Sbjct: 138 FINFYSTYCSHCHQLAPTWRKFA 160
>AC084197-8|AAG23476.1| 228|Caenorhabditis elegans Hypothetical
protein Y73B6BL.12 protein.
Length = 228
Score = 33.1 bits (72), Expect = 0.069
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 279 FYSPWCXHCT*FYPIWSELAE 341
F++PWC HC F PI+ +A+
Sbjct: 134 FFAPWCGHCIQFAPIYDRIAK 154
>U40411-4|AAC47065.1| 440|Caenorhabditis elegans Temporarily
assigned gene nameprotein 320 protein.
Length = 440
Score = 32.3 bits (70), Expect = 0.12
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 231 SNFKFQIEEMDGNFIM-FYSPWCXHCT*FYPIWSELA 338
+NF+ ++ D +I+ FY+PWC HC P + + A
Sbjct: 32 ANFQSKVINSDDIWIVEFYAPWCGHCKSLVPEYKKAA 68
Score = 30.3 bits (65), Expect = 0.49
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 273 IMFYSPWCXHCT*FYPIWSELAELVNTK 356
+ F++PWC HC P W A + K
Sbjct: 187 VEFFAPWCGHCKSLEPQWKAAASELKGK 214
>Z69637-1|CAA93467.1| 601|Caenorhabditis elegans Hypothetical
protein F35G2.1a protein.
Length = 601
Score = 31.5 bits (68), Expect = 0.21
Identities = 17/67 (25%), Positives = 28/67 (41%)
Frame = +3
Query: 147 TTMNILPYLFVFPYLVAPEQSSVY*YNPSNFKFQIEEMDGNFIMFYSPWCXHCT*FYPIW 326
+T N +P + P L P + + F + + FY+ WC HC F P +
Sbjct: 32 STFNYVP-IGQNPTLYTPGFEPIMHLDQMTFNDTVFSDRAFLVEFYADWCGHCRAFAPYF 90
Query: 327 SELAELV 347
+ A +V
Sbjct: 91 RQFANMV 97
>U39646-7|AAA80371.1| 623|Caenorhabditis elegans Hypothetical
protein F47B7.2a protein.
Length = 623
Score = 28.3 bits (60), Expect = 2.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 267 NFIMFYSPWCXHCT*FYPIWSELAE 341
+FI FYS WC C + P + + A+
Sbjct: 69 HFIEFYSSWCGACIGYAPTFKKFAK 93
>U39646-6|AAK72058.1| 624|Caenorhabditis elegans Hypothetical
protein F47B7.2c protein.
Length = 624
Score = 28.3 bits (60), Expect = 2.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 267 NFIMFYSPWCXHCT*FYPIWSELAE 341
+FI FYS WC C + P + + A+
Sbjct: 69 HFIEFYSSWCGACIGYAPTFKKFAK 93
>U39646-5|AAK72057.1| 678|Caenorhabditis elegans Hypothetical
protein F47B7.2b protein.
Length = 678
Score = 28.3 bits (60), Expect = 2.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 267 NFIMFYSPWCXHCT*FYPIWSELAE 341
+FI FYS WC C + P + + A+
Sbjct: 69 HFIEFYSSWCGACIGYAPTFKKFAK 93
>U23168-7|AAC38808.1| 115|Caenorhabditis elegans Hypothetical
protein B0228.5a protein.
Length = 115
Score = 27.9 bits (59), Expect = 2.6
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +3
Query: 222 YNPSNFKFQIEEMDGNFIM--FYSPWCXHCT*FYPIWSELA 338
Y S+F+ I + I+ FY+ WC C P++ ELA
Sbjct: 13 YFQSDFEQLIRQHPEKIIILDFYATWCGPCKAIAPLYKELA 53
>DQ241299-1|ABB45863.1| 115|Caenorhabditis elegans TRX-1a protein.
Length = 115
Score = 27.9 bits (59), Expect = 2.6
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +3
Query: 222 YNPSNFKFQIEEMDGNFIM--FYSPWCXHCT*FYPIWSELA 338
Y S+F+ I + I+ FY+ WC C P++ ELA
Sbjct: 13 YFQSDFEQLIRQHPEKIIILDFYATWCGPCKAIAPLYKELA 53
>U97402-2|AAB63409.2| 393|Caenorhabditis elegans Hypothetical
protein C30H7.2a protein.
Length = 393
Score = 27.5 bits (58), Expect = 3.4
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +3
Query: 159 ILPYLFVFPYLVAPEQSSVY*YNPSNFKFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELA 338
+L +L + + A + V NF+ I+ + F+ FY+ WC PI+ E +
Sbjct: 1 MLRWLSLLLFCPALLNAEVVSLTSQNFEQTIQANELVFVNFYADWCRFSQMLKPIFLEAS 60
Query: 339 E 341
E
Sbjct: 61 E 61
>U97402-1|ABB51193.1| 393|Caenorhabditis elegans Hypothetical
protein C30H7.2b protein.
Length = 393
Score = 27.5 bits (58), Expect = 3.4
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +3
Query: 159 ILPYLFVFPYLVAPEQSSVY*YNPSNFKFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELA 338
+L +L + + A + V NF+ I+ + F+ FY+ WC PI+ E +
Sbjct: 1 MLRWLSLLLFCPALLNAEVVSLTSQNFEQTIQANELVFVNFYADWCRFSQMLKPIFLEAS 60
Query: 339 E 341
E
Sbjct: 61 E 61
>AF047657-6|AAK18946.1| 337|Caenorhabditis elegans Serpentine
receptor, class h protein243 protein.
Length = 337
Score = 27.1 bits (57), Expect = 4.5
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +3
Query: 120 RHCLEIYSFTTMNILPYLFVFPYLVAPEQSS 212
+H + Y +P++F+ P+L PEQ +
Sbjct: 133 KHIRKAYLIAVYTSIPFIFLPPFLTIPEQET 163
>U23168-6|AAP86623.1| 114|Caenorhabditis elegans Hypothetical
protein B0228.5b protein.
Length = 114
Score = 26.6 bits (56), Expect = 6.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 279 FYSPWCXHCT*FYPIWSELA 338
FY+ WC C P++ ELA
Sbjct: 33 FYATWCGPCKAIAPLYKELA 52
>DQ241300-1|ABB45864.1| 114|Caenorhabditis elegans TRX-1b protein.
Length = 114
Score = 26.6 bits (56), Expect = 6.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 279 FYSPWCXHCT*FYPIWSELA 338
FY+ WC C P++ ELA
Sbjct: 33 FYATWCGPCKAIAPLYKELA 52
>AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical
protein Y55F3AR.2 protein.
Length = 254
Score = 26.6 bits (56), Expect = 6.0
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +3
Query: 240 KFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELA 338
KF F+ F + WC C PI+S+LA
Sbjct: 15 KFSAGNGKAVFVDFTASWCGPCQYIAPIFSDLA 47
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,123,799
Number of Sequences: 27780
Number of extensions: 152556
Number of successful extensions: 364
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 364
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 567749674
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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