Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0510
(380 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g04980.1 68414.m00497 thioredoxin family protein similar to S... 41 3e-04
At1g77510.1 68414.m09026 protein disulfide isomerase, putative s... 40 6e-04
At2g32920.1 68415.m04036 thioredoxin family protein similar to S... 39 0.001
At3g54960.1 68416.m06094 thioredoxin family protein similar to p... 36 0.009
At1g35620.1 68414.m04425 thioredoxin family protein similar to S... 36 0.009
At1g07960.3 68414.m00867 thioredoxin family protein low similari... 35 0.016
At1g07960.2 68414.m00866 thioredoxin family protein low similari... 35 0.016
At1g07960.1 68414.m00865 thioredoxin family protein low similari... 35 0.016
At1g21750.2 68414.m02723 protein disulfide isomerase, putative s... 34 0.037
At1g21750.1 68414.m02722 protein disulfide isomerase, putative s... 34 0.037
At2g47470.2 68415.m05924 thioredoxin family protein similar to p... 33 0.049
At2g47470.1 68415.m05925 thioredoxin family protein similar to p... 33 0.049
At5g60640.2 68418.m07611 thioredoxin family protein similar to p... 33 0.085
At5g60640.1 68418.m07610 thioredoxin family protein similar to p... 33 0.085
At4g27080.1 68417.m03893 thioredoxin family protein contains Pfa... 30 0.45
At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-... 30 0.60
At4g35890.1 68417.m05097 La domain-containing protein contains P... 29 1.0
At5g06440.2 68418.m00722 expressed protein similar to unknown pr... 29 1.4
At5g06440.1 68418.m00721 expressed protein similar to unknown pr... 29 1.4
At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-... 28 1.8
At1g62180.1 68414.m07014 5'-adenylylsulfate reductase 2, chlorop... 28 2.4
At2g33200.1 68415.m04067 F-box family protein contains F-box dom... 27 3.2
At3g55580.1 68416.m06171 regulator of chromosome condensation (R... 26 7.4
At3g09880.1 68416.m01178 serine/threonine protein phosphatase 2A... 26 7.4
At1g43560.1 68414.m05000 thioredoxin family protein contains Pfa... 26 7.4
At1g02010.1 68414.m00119 cytokinesis-related Sec1 protein, putat... 26 7.4
At5g59100.1 68418.m07404 subtilase family protein contains simil... 26 9.7
At4g21990.1 68417.m03183 5'-adenylylsulfate reductase (APR3) / P... 26 9.7
>At1g04980.1 68414.m00497 thioredoxin family protein similar to
SP|Q63081 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Rattus norvegicus}; contains Pfam profile
PF00085: Thioredoxin
Length = 443
Score = 40.7 bits (91), Expect = 3e-04
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 207 SSVY*YNPSNFKFQIEEMDGNFIM-FYSPWCXHCT*FYPIWSELA 338
S V PSNFK ++ +G ++ F++PWC HC P W ++A
Sbjct: 28 SPVLQLTPSNFKSKVLNSNGVVLVEFFAPWCGHCQSLTPTWEKVA 72
Score = 35.1 bits (77), Expect = 0.016
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 201 EQSSVY*YNPSNFKFQIEEMDGNFIM-FYSPWCXHCT*FYPIWSELAELVNTK 356
E S+ N SNF + E +I+ F++PWC HC P W + A + K
Sbjct: 161 EPSASVELNSSNFDELVTESKELWIVEFFAPWCGHCKKLAPEWKKAANNLKGK 213
>At1g77510.1 68414.m09026 protein disulfide isomerase, putative
similar to protein disulfide isomerase precursor
GB:P29828 GI:4704766 [Medicago sativa]; Pfam HMM hit:
PF00085 Thioredoxins
Length = 508
Score = 39.9 bits (89), Expect = 6e-04
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +3
Query: 144 FTTMNILPYLFVFPYLVAPEQSS--VY*YNPSNFKFQIEEMDGNFIMFYSPWCXHCT*FY 317
F +IL L +F + E++ V + SNF I + D + FY+PWC HC
Sbjct: 6 FACFSILLLLSLFVSSIRSEETKEFVLTLDHSNFTETISKHDFIVVEFYAPWCGHCQKLA 65
Query: 318 PIWSELAELVNTKDSKFAIAQ 380
P + + A +++ + A+A+
Sbjct: 66 PEYEKAASELSSHNPPLALAK 86
Score = 32.7 bits (71), Expect = 0.085
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 273 IMFYSPWCXHCT*FYPIWSELA 338
I FY+PWC HC PI E+A
Sbjct: 395 IEFYAPWCGHCQKLAPILDEVA 416
>At2g32920.1 68415.m04036 thioredoxin family protein similar to
SP|Q15084 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Homo sapiens}; contains Pfam profile PF00085:
Thioredoxin
Length = 440
Score = 38.7 bits (86), Expect = 0.001
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +3
Query: 231 SNFKFQIEEMDGNFIM-FYSPWCXHCT*FYPIWSELAELV 347
SNFK ++ +G ++ F++PWC HC P W ++A ++
Sbjct: 38 SNFKSKVLNSNGVVLVEFFAPWCGHCKALTPTWEKVANIL 77
Score = 35.1 bits (77), Expect = 0.016
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 201 EQSSVY*YNPSNFKFQIEEMDGNFIM-FYSPWCXHCT*FYPIWSELAELVNTK 356
E S+ N SNF + E + +I+ F++PWC HC P W A+ + K
Sbjct: 160 EPSASVELNASNFDDLVIESNELWIVEFFAPWCGHCKKLAPEWKRAAKNLQGK 212
>At3g54960.1 68416.m06094 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 579
Score = 35.9 bits (79), Expect = 0.009
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 231 SNF-KFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAELVNTKDS 362
+NF + ++E + Y+PWC HC F PI+++L + + DS
Sbjct: 445 NNFDEIVLDESKDVLLEIYAPWCGHCQSFEPIYNKLGKYLKGIDS 489
>At1g35620.1 68414.m04425 thioredoxin family protein similar to
SP|Q43116 Protein disulfide isomerase precursor (PDI)
(EC 5.3.4.1) {Ricinus communis}; contains Pfam profile
PF00085: Thioredoxin
Length = 440
Score = 35.9 bits (79), Expect = 0.009
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +3
Query: 231 SNFKFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAELVNTKDSKFAIAQ 380
SNF I D F+ FY+PWC HC P A ++ IA+
Sbjct: 40 SNFDSAISTFDCIFVDFYAPWCGHCKRLNPELDAAAPILAKLKQPIVIAK 89
>At1g07960.3 68414.m00867 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 35.1 bits (77), Expect = 0.016
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 228 PSNFKFQIEEMDGN-FIMFYSPWCXHCT*FYPIWSELAELVNTKD 359
P F +I+E D F+ F PWC HC +W +L + + D
Sbjct: 32 PETFSDKIKEKDTAWFVKFCVPWCKHCKKLGNLWEDLGKAMEGDD 76
>At1g07960.2 68414.m00866 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 35.1 bits (77), Expect = 0.016
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 228 PSNFKFQIEEMDGN-FIMFYSPWCXHCT*FYPIWSELAELVNTKD 359
P F +I+E D F+ F PWC HC +W +L + + D
Sbjct: 32 PETFSDKIKEKDTAWFVKFCVPWCKHCKKLGNLWEDLGKAMEGDD 76
>At1g07960.1 68414.m00865 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 35.1 bits (77), Expect = 0.016
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 228 PSNFKFQIEEMDGN-FIMFYSPWCXHCT*FYPIWSELAELVNTKD 359
P F +I+E D F+ F PWC HC +W +L + + D
Sbjct: 32 PETFSDKIKEKDTAWFVKFCVPWCKHCKKLGNLWEDLGKAMEGDD 76
>At1g21750.2 68414.m02723 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 487
Score = 33.9 bits (74), Expect = 0.037
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +3
Query: 231 SNFKFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAELVNTKDSKFAIAQ 380
+NF I + D + FY+PWC HC P + + A +++ +A+
Sbjct: 38 TNFTDTINKHDFIVVEFYAPWCGHCKQLAPEYEKAASALSSNVPPVVLAK 87
Score = 33.1 bits (72), Expect = 0.064
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 279 FYSPWCXHCT*FYPIWSELAELVNTKDSKFAIAQ 380
FY+PWC HC PI E+A + DS IA+
Sbjct: 399 FYAPWCGHCQKLAPILDEVA-VSYQSDSSVVIAK 431
>At1g21750.1 68414.m02722 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 501
Score = 33.9 bits (74), Expect = 0.037
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +3
Query: 231 SNFKFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAELVNTKDSKFAIAQ 380
+NF I + D + FY+PWC HC P + + A +++ +A+
Sbjct: 38 TNFTDTINKHDFIVVEFYAPWCGHCKQLAPEYEKAASALSSNVPPVVLAK 87
Score = 33.1 bits (72), Expect = 0.064
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 279 FYSPWCXHCT*FYPIWSELAELVNTKDSKFAIAQ 380
FY+PWC HC PI E+A + DS IA+
Sbjct: 399 FYAPWCGHCQKLAPILDEVA-VSYQSDSSVVIAK 431
>At2g47470.2 68415.m05924 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 266
Score = 33.5 bits (73), Expect = 0.049
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +3
Query: 189 LVAPEQSSVY*YNPSNFKFQIEEMDGNFIMFYSPWCXHCT*FYPIWSEL 335
LV+ V +F+ ++ + G + FY+PWC HC P + +L
Sbjct: 17 LVSAVADDVVVLTDDSFEKEVGKDKGALVEFYAPWCGHCKKLAPEYEKL 65
Score = 33.1 bits (72), Expect = 0.064
Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 228 PSNF-KFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAELVNTKD 359
P NF + +++ + FY+PWC HC P + ++A + ++
Sbjct: 148 PDNFDEIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEE 192
>At2g47470.1 68415.m05925 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 361
Score = 33.5 bits (73), Expect = 0.049
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +3
Query: 189 LVAPEQSSVY*YNPSNFKFQIEEMDGNFIMFYSPWCXHCT*FYPIWSEL 335
LV+ V +F+ ++ + G + FY+PWC HC P + +L
Sbjct: 17 LVSAVADDVVVLTDDSFEKEVGKDKGALVEFYAPWCGHCKKLAPEYEKL 65
Score = 33.1 bits (72), Expect = 0.064
Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 228 PSNF-KFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAELVNTKD 359
P NF + +++ + FY+PWC HC P + ++A + ++
Sbjct: 148 PDNFDEIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEE 192
>At5g60640.2 68418.m07611 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 536
Score = 32.7 bits (71), Expect = 0.085
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 282 YSPWCXHCT*FYPIWSELAELVNTKDS 362
Y+PWC HC P++++LA+ + + DS
Sbjct: 467 YAPWCGHCQALEPMYNKLAKHLRSIDS 493
Score = 31.1 bits (67), Expect = 0.26
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 234 NFKFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELA 338
NF IE + FY+PWC HC P ++ A
Sbjct: 112 NFTDVIENNQYVLVEFYAPWCGHCQSLAPEYAAAA 146
>At5g60640.1 68418.m07610 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 597
Score = 32.7 bits (71), Expect = 0.085
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 282 YSPWCXHCT*FYPIWSELAELVNTKDS 362
Y+PWC HC P++++LA+ + + DS
Sbjct: 467 YAPWCGHCQALEPMYNKLAKHLRSIDS 493
Score = 31.1 bits (67), Expect = 0.26
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 234 NFKFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELA 338
NF IE + FY+PWC HC P ++ A
Sbjct: 112 NFTDVIENNQYVLVEFYAPWCGHCQSLAPEYAAAA 146
>At4g27080.1 68417.m03893 thioredoxin family protein contains Pfam
PF00085: Thioredoxin
Length = 480
Score = 30.3 bits (65), Expect = 0.45
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +3
Query: 273 IMFYSPWCXHCT*FYPIWSELAELVNTK 356
+ FY+PWC C P W + A+ + +
Sbjct: 163 VNFYAPWCYWCNLLKPSWEKAAKQIKER 190
>At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-M1)
nearly identical to SP|O48737 Thioredoxin M-type 1,
chloroplast precursor (TRX-M1) {Arabidopsis thaliana};
similar to ESTs gb|T13714, gb|H76398, gb|N37762,
gb|AA042639, gb|T21104, emb|Z30901
Length = 179
Score = 29.9 bits (64), Expect = 0.60
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 270 FIMFYSPWCXHCT*FYPIWSELAE 341
F+ F++PWC C PI +ELA+
Sbjct: 96 FVDFWAPWCGPCKMIDPIVNELAQ 119
>At4g35890.1 68417.m05097 La domain-containing protein contains Pfam
PF05383: La domain
Length = 523
Score = 29.1 bits (62), Expect = 1.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 295 VXIAHNFIRYGQNWQSWLIPRTP 363
V + +FIR NWQ+W++ R P
Sbjct: 433 VEVQGDFIRKRDNWQNWVLRRNP 455
>At5g06440.2 68418.m00722 expressed protein similar to unknown
protein (gb|AAF23188.1)
Length = 479
Score = 28.7 bits (61), Expect = 1.4
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = -1
Query: 320 RIKLCAMXTPWRVKHNKVSIHFFDLEFEITGIVLV 216
+I L M PW + ++ +H+F E+ G+V++
Sbjct: 154 QICLARMKVPWPLTEREMILHYFSFEYFKDGLVVI 188
>At5g06440.1 68418.m00721 expressed protein similar to unknown
protein (gb|AAF23188.1)
Length = 405
Score = 28.7 bits (61), Expect = 1.4
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = -1
Query: 320 RIKLCAMXTPWRVKHNKVSIHFFDLEFEITGIVLV 216
+I L M PW + ++ +H+F E+ G+V++
Sbjct: 80 QICLARMKVPWPLTEREMILHYFSFEYFKDGLVVI 114
>At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-M4)
nearly identical to SP|Q9SEU6 Thioredoxin M-type 4,
chloroplast precursor (TRX-M4) {Arabidopsis thaliana}
Length = 193
Score = 28.3 bits (60), Expect = 1.8
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Frame = +3
Query: 225 NPSNFKFQIEEMDGN---FIMFYSPWCXHCT*FYPIWSELAE 341
N S+ ++Q + ++ + + F++PWC C +PI +LA+
Sbjct: 90 NLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAK 131
>At1g62180.1 68414.m07014 5'-adenylylsulfate reductase 2,
chloroplast (APR2) (APSR) / adenosine 5'-phosphosulfate
5'-adenylylsulfate (APS) sulfotransferase 2 /
3'-phosphoadenosine-5'-phosphosulfate (PAPS) reductase
homolog 43 (PRH-43) identical to SP|P92981
5'-adenylylsulfate reductase 2, chloroplast precursor
(EC 1.8.4.9) (Adenosine 5'-phosphosulfate
5'-adenylylsulfate sulfotransferase 2) (APS
sulfotransferase 2) (Thioredoxin independent APS
reductase 2) (3'-phosphoadenosine-5'-phosphosulfate
reductase homolog 43) (PAPS reductase homolog 43)
(Prh-43) {Arabidopsis thaliana}; identical to cDNA PAPS
reductase homolog (PRH43) GI:1710115
Length = 454
Score = 27.9 bits (59), Expect = 2.4
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 273 IMFYSPWCXHCT*FYPIWSELAELVNTKDSKFA 371
++ Y+PWC C + ELAE + K K A
Sbjct: 367 VVLYAPWCPFCQAMEASYIELAEKLAGKGVKVA 399
>At2g33200.1 68415.m04067 F-box family protein contains F-box domain
Pfam:PF00646
Length = 376
Score = 27.5 bits (58), Expect = 3.2
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 293 PWRVKHNKVSIHFFD 249
PWR+K NK+S FD
Sbjct: 51 PWRIKFNKISTSLFD 65
>At3g55580.1 68416.m06171 regulator of chromosome condensation
(RCC1) family protein UVB-resistance protein UVR8,
Arabidopsis thaliana, EMBL:AF130441; contains Pfam
PF00415: Regulator of chromosome condensation (RCC1)
domain
Length = 488
Score = 26.2 bits (55), Expect = 7.4
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 379 WAMANLESLVLTSSANSDHIG*NYVQCXHHGE 284
+AMA ES L + ++D +G +YV HGE
Sbjct: 75 FAMATAESGKLITWGSTDDLGQSYVTSGKHGE 106
>At3g09880.1 68416.m01178 serine/threonine protein phosphatase 2A
(PP2A) regulatory subunit B' (B'beta) identical to B'
regulatory subunit of PP2A [Arabidopsis thaliana]
GI:2160692; similar to SWISS-PROT:Q28653
serine/threonine protein phosphatase 2A, 56 kDa
regulatory subunit, delta isoform (PP2A, B subunit, B'
delta isoform, PP2A, B subunit, B56 delta isoform, PP2A,
B subunit, PR61 delta isoform, PP2A, B subunit, R5 delta
isoform, PP2A, B subunit, B'-gamma) [Oryctolagus
cuniculus]; contains Pfam domain, PF01603: Protein
phosphatase 2A regulatory B subunit (B56 family)
Length = 499
Score = 26.2 bits (55), Expect = 7.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 26 CCFIFNLLST*LMRRRKDINENNLKKLPQFTEA 124
CCF+F+ T R K+I L +L F ++
Sbjct: 94 CCFLFDFTDTIKNARDKEIKRQTLLELVDFIQS 126
>At1g43560.1 68414.m05000 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to thioredoxin
GI:142153 from [Synechococcus PCC6301]
Length = 167
Score = 26.2 bits (55), Expect = 7.4
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 279 FYSPWCXHCT*FYPIWSELAE 341
FY+ WC C PI +E++E
Sbjct: 83 FYATWCGPCQLMVPILNEVSE 103
>At1g02010.1 68414.m00119 cytokinesis-related Sec1 protein, putative
similar to cytokinesis-related Sec1 protein KEULE
[Arabidopsis thaliana] gi|12659318|gb|AAK01291; contains
Pfam domain, PF00995: Sec1 family; non-consensus GC
donor splice site at exon boundary 46833
Length = 676
Score = 26.2 bits (55), Expect = 7.4
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 231 WDCISKQNSVQELQDTET 178
WDCISK ++ TET
Sbjct: 234 WDCISKYKAIPNFPQTET 251
>At5g59100.1 68418.m07404 subtilase family protein contains
similarity to prepro-cucumisin GI:807698 from [Cucumis
melo]
Length = 741
Score = 25.8 bits (54), Expect = 9.7
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -1
Query: 293 PWRVKHNKVSIHFFDLEFEITGIVLVNRTLFRSYK 189
P R ++ +S H L+ EITG L+ L RSYK
Sbjct: 43 PSREEYTPMSDHMSILQ-EITGESLIENRLVRSYK 76
>At4g21990.1 68417.m03183 5'-adenylylsulfate reductase (APR3) / PAPS
reductase homolog (PRH26) identical to
5'-adenylylsulfate reductase [Arabidopsis thaliana]
GI:2738760; identical to cDNA PAPS reductase homolog
(PRH26) GI:1710113
Length = 458
Score = 25.8 bits (54), Expect = 9.7
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +3
Query: 273 IMFYSPWCXHCT*FYPIWSELAELVNTKDSKFA 371
++ Y+PWC C + ELA+ + K A
Sbjct: 371 VVLYAPWCPFCQAMEASFDELADKLGGSGVKVA 403
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,643,697
Number of Sequences: 28952
Number of extensions: 140275
Number of successful extensions: 360
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 360
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 527724392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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