Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0496
(352 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC050416-1|AAH50416.1| 553|Homo sapiens solute carrier family 4... 31 1.0
AY033593-1|AAK54386.1| 553|Homo sapiens prostein protein. 31 1.0
AL137787-4|CAI42175.1| 1758|Homo sapiens FERM and PDZ domain con... 29 3.1
AL035088-2|CAI42749.1| 1758|Homo sapiens FERM and PDZ domain con... 29 3.1
BC142688-1|AAI42689.1| 1016|Homo sapiens elastin microfibril int... 29 5.5
BC009947-1|AAH09947.2| 580|Homo sapiens EMILIN1 protein protein. 29 5.5
AF162780-1|AAF25006.1| 1016|Homo sapiens elastin microfibril int... 29 5.5
AF088916-1|AAD42161.1| 1016|Homo sapiens emilin precursor protein. 29 5.5
AC013403-2|AAX93166.1| 1016|Homo sapiens unknown protein. 29 5.5
BC110637-1|AAI10638.1| 546|Homo sapiens FRMD4B protein protein. 28 7.2
AB023230-1|BAA76857.1| 1062|Homo sapiens KIAA1013 protein protein. 28 7.2
X97187-1|CAA65825.1| 1704|Homo sapiens ABC-C transporter protein. 28 9.5
U78735-1|AAC50967.1| 1704|Homo sapiens ABC3 protein. 28 9.5
DQ073080-1|AAY57325.1| 1704|Homo sapiens ATP-binding cassette, s... 28 9.5
AB210044-1|BAE06126.1| 1708|Homo sapiens ABCA3 variant protein p... 28 9.5
AB070929-1|BAB86781.1| 1704|Homo sapiens lamellar body membrane ... 28 9.5
>BC050416-1|AAH50416.1| 553|Homo sapiens solute carrier family 45,
member 3 protein.
Length = 553
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 224 DDLSVPSLREYTCPCRARNPYTTPGA 147
+ LS PSL + CPCRAR + GA
Sbjct: 230 EGLSAPSLSPHCCPCRARLAFRNLGA 255
>AY033593-1|AAK54386.1| 553|Homo sapiens prostein protein.
Length = 553
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 224 DDLSVPSLREYTCPCRARNPYTTPGA 147
+ LS PSL + CPCRAR + GA
Sbjct: 230 EGLSAPSLSPHCCPCRARLAFRNLGA 255
>AL137787-4|CAI42175.1| 1758|Homo sapiens FERM and PDZ domain
containing 3 protein.
Length = 1758
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = -3
Query: 254 SRNQSVELLEDDLSVPSLREYTCPCRARNPYTTPGASCSPKFLAS*FCHICQCTYHQQVR 75
S Q E++ DD SL C RAR+ YT S + L + +C C+ +Q+
Sbjct: 549 SSGQGYEVVPDDFDAASLDHEPCASRARS-YTLDN-SLGAEAL-NFYCDSCKAKLQEQLG 605
Query: 74 PR 69
PR
Sbjct: 606 PR 607
>AL035088-2|CAI42749.1| 1758|Homo sapiens FERM and PDZ domain
containing 3 protein.
Length = 1758
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = -3
Query: 254 SRNQSVELLEDDLSVPSLREYTCPCRARNPYTTPGASCSPKFLAS*FCHICQCTYHQQVR 75
S Q E++ DD SL C RAR+ YT S + L + +C C+ +Q+
Sbjct: 549 SSGQGYEVVPDDFDAASLDHEPCASRARS-YTLDN-SLGAEAL-NFYCDSCKAKLQEQLG 605
Query: 74 PR 69
PR
Sbjct: 606 PR 607
>BC142688-1|AAI42689.1| 1016|Homo sapiens elastin microfibril
interfacer 1 protein.
Length = 1016
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -3
Query: 272 IGLQCISRNQSVELLEDDLSVPSLREYTCPCRARNPYTTPGASCSP 135
+G + + N S++LLED L SL++ T P P PG P
Sbjct: 786 LGRRLGALNSSLQLLEDRLHQLSLKDLTGPAGEAGPPGPPGLQGPP 831
>BC009947-1|AAH09947.2| 580|Homo sapiens EMILIN1 protein protein.
Length = 580
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -3
Query: 272 IGLQCISRNQSVELLEDDLSVPSLREYTCPCRARNPYTTPGASCSP 135
+G + + N S++LLED L SL++ T P P PG P
Sbjct: 350 LGRRLGALNSSLQLLEDRLHQLSLKDLTGPAGEAGPPGPPGLQGPP 395
>AF162780-1|AAF25006.1| 1016|Homo sapiens elastin microfibril
interfase located protein protein.
Length = 1016
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -3
Query: 272 IGLQCISRNQSVELLEDDLSVPSLREYTCPCRARNPYTTPGASCSP 135
+G + + N S++LLED L SL++ T P P PG P
Sbjct: 786 LGRRLGALNSSLQLLEDRLHQLSLKDLTGPAGEAGPPGPPGLQGPP 831
>AF088916-1|AAD42161.1| 1016|Homo sapiens emilin precursor protein.
Length = 1016
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -3
Query: 272 IGLQCISRNQSVELLEDDLSVPSLREYTCPCRARNPYTTPGASCSP 135
+G + + N S++LLED L SL++ T P P PG P
Sbjct: 786 LGRRLGALNSSLQLLEDRLHQLSLKDLTGPAGEAGPPGPPGLQGPP 831
>AC013403-2|AAX93166.1| 1016|Homo sapiens unknown protein.
Length = 1016
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -3
Query: 272 IGLQCISRNQSVELLEDDLSVPSLREYTCPCRARNPYTTPGASCSP 135
+G + + N S++LLED L SL++ T P P PG P
Sbjct: 786 LGRRLGALNSSLQLLEDRLHQLSLKDLTGPAGEAGPPGPPGLQGPP 831
>BC110637-1|AAI10638.1| 546|Homo sapiens FRMD4B protein protein.
Length = 546
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = -3
Query: 281 RPFIGLQCISRNQSVELLEDDLSV--PSLREYTCPCRARNPYTT 156
+PF L R+ S E+L+D S S EY C PY T
Sbjct: 221 KPFFSLSKSQRSSSTEILDDGSSYTSQSSTEYYCVTPVTGPYYT 264
>AB023230-1|BAA76857.1| 1062|Homo sapiens KIAA1013 protein protein.
Length = 1062
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = -3
Query: 281 RPFIGLQCISRNQSVELLEDDLSV--PSLREYTCPCRARNPYTT 156
+PF L R+ S E+L+D S S EY C PY T
Sbjct: 737 KPFFSLSKSQRSSSTEILDDGSSYTSQSSTEYYCVTPVTGPYYT 780
>X97187-1|CAA65825.1| 1704|Homo sapiens ABC-C transporter protein.
Length = 1704
Score = 27.9 bits (59), Expect = 9.5
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +2
Query: 41 KVLIVLSCVLVAVLADDKYTDKYDKINLQEIL-ENKRLLESYMDCVLGKGKCTPEGKELK 217
+VL+ L+CV +A+LA + ++ +D L+ L E R + + V G + G++L
Sbjct: 929 QVLVPLTCVTLALLAINYSSELFDDPMLRLTLGEYGRTVVPFS--VPGTSQL---GQQLS 983
Query: 218 DHLQEALQ 241
+HL++ALQ
Sbjct: 984 EHLKDALQ 991
>U78735-1|AAC50967.1| 1704|Homo sapiens ABC3 protein.
Length = 1704
Score = 27.9 bits (59), Expect = 9.5
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +2
Query: 41 KVLIVLSCVLVAVLADDKYTDKYDKINLQEIL-ENKRLLESYMDCVLGKGKCTPEGKELK 217
+VL+ L+CV +A+LA + ++ +D L+ L E R + + V G + G++L
Sbjct: 929 QVLVPLTCVTLALLAINYSSELFDDPMLRLTLGEYGRTVVPFS--VPGTSQL---GQQLS 983
Query: 218 DHLQEALQ 241
+HL++ALQ
Sbjct: 984 EHLKDALQ 991
>DQ073080-1|AAY57325.1| 1704|Homo sapiens ATP-binding cassette,
sub-family A (ABC1), member 3 protein.
Length = 1704
Score = 27.9 bits (59), Expect = 9.5
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +2
Query: 41 KVLIVLSCVLVAVLADDKYTDKYDKINLQEIL-ENKRLLESYMDCVLGKGKCTPEGKELK 217
+VL+ L+CV +A+LA + ++ +D L+ L E R + + V G + G++L
Sbjct: 929 QVLVPLTCVTLALLAINYSSELFDDPMLRLTLGEYGRTVVPFS--VPGTSQL---GQQLS 983
Query: 218 DHLQEALQ 241
+HL++ALQ
Sbjct: 984 EHLKDALQ 991
>AB210044-1|BAE06126.1| 1708|Homo sapiens ABCA3 variant protein
protein.
Length = 1708
Score = 27.9 bits (59), Expect = 9.5
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +2
Query: 41 KVLIVLSCVLVAVLADDKYTDKYDKINLQEIL-ENKRLLESYMDCVLGKGKCTPEGKELK 217
+VL+ L+CV +A+LA + ++ +D L+ L E R + + V G + G++L
Sbjct: 933 QVLVPLTCVTLALLAINYSSELFDDPMLRLTLGEYGRTVVPFS--VPGTSQL---GQQLS 987
Query: 218 DHLQEALQ 241
+HL++ALQ
Sbjct: 988 EHLKDALQ 995
>AB070929-1|BAB86781.1| 1704|Homo sapiens lamellar body membrane
specific ATP-binding cassette protein protein.
Length = 1704
Score = 27.9 bits (59), Expect = 9.5
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +2
Query: 41 KVLIVLSCVLVAVLADDKYTDKYDKINLQEIL-ENKRLLESYMDCVLGKGKCTPEGKELK 217
+VL+ L+CV +A+LA + ++ +D L+ L E R + + V G + G++L
Sbjct: 929 QVLVPLTCVTLALLAINYSSELFDDPMLRLTLGEYGRTVVPFS--VPGTSQL---GQQLS 983
Query: 218 DHLQEALQ 241
+HL++ALQ
Sbjct: 984 EHLKDALQ 991
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,573,986
Number of Sequences: 237096
Number of extensions: 925252
Number of successful extensions: 2584
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2584
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2084089752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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