Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0487
         (414 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    25   0.39 
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   3.6  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   6.3  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   6.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.3  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   6.3  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.39
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 244 VPFYNYESRSPRNELW 197
           VP+YN+E  S  ++LW
Sbjct: 24  VPYYNFEKFSLEHQLW 39


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = -1

Query: 291 SSLLGITNVVPSRTGLS 241
           SSL G+TN VPS  GLS
Sbjct: 68  SSLNGLTNNVPS-NGLS 83


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 238 FYNYESRSPRNELWNAKLHSFRPN 167
           F NYE +SP +E     + S++ N
Sbjct: 229 FENYEPKSPEDEELLDAIFSWQQN 252


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +1

Query: 1   YIMKKNCXFLKVIIRKS*LVNYELKNILYI 90
           Y   K C FL++++    +V   LK+I  I
Sbjct: 49  YNFTKKCYFLRMVLIDLLIVGCILKHIFNI 78


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +2

Query: 308 YIYFFQNISFILCLSH 355
           +I+F  ++ F+LCL +
Sbjct: 186 FIFFNMHLLFLLCLDY 201


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = -3

Query: 241 PFYNYESRSPRNELWNAKLHSFRPN 167
           P  NYE     + + N ++H  +P+
Sbjct: 150 PEQNYEVDESASVMTNGRIHGIQPS 174


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,827
Number of Sequences: 336
Number of extensions: 1812
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9068614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)