Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0487
         (414 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    24   0.78 
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    23   1.8  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    23   1.8  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   5.5  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     20   9.6  

>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.8 bits (49), Expect = 0.78
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 124 SNKYKYNSERLEYIICSLIRNLQANFS 44
           SN Y YN+   + + C+  R L  N +
Sbjct: 86  SNNYNYNNNNYKKLYCNNYRKLYYNIN 112


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -3

Query: 124 SNKYKYNSERLEYIICSLIRNLQANFS 44
           SN Y YN+   + + C+  + L  N +
Sbjct: 86  SNNYNYNNNNYKKLYCNNYKKLYYNIN 112


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -3

Query: 124 SNKYKYNSERLEYIICSLIRNLQANFS 44
           SN Y YN+   + + C+  + L  N +
Sbjct: 86  SNNYNYNNNNYKKLYCNNYKKLYYNIN 112


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 187 ILRSRVHFGDSGTRNY 234
           +LR + HF D  TR Y
Sbjct: 456 VLRDKGHFDDGTTRFY 471


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = +3

Query: 303 NGIYIFFKTFPLFYVYHIRWMFNE 374
           +G+ +F++ F    +  IRW   E
Sbjct: 44  DGLLVFYEVFRYLELAMIRWKDTE 67


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,484
Number of Sequences: 438
Number of extensions: 2314
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10503195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)