Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0486
         (321 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RTB6 Cluster: Dynein beta chain, ciliary; n=12; Plasm...    33   1.6  
UniRef50_Q22AB7 Cluster: Putative uncharacterized protein; n=1; ...    32   2.1  
UniRef50_Q4YAD4 Cluster: Putative uncharacterized protein; n=3; ...    31   6.5  
UniRef50_Q61ML7 Cluster: Putative uncharacterized protein CBG084...    30   8.6  

>UniRef50_Q7RTB6 Cluster: Dynein beta chain, ciliary; n=12; Plasmodium
            (Vinckeia)|Rep: Dynein beta chain, ciliary - Plasmodium
            yoelii yoelii
          Length = 5174

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +2

Query: 155  SNYLHKLCHXYHQTNI*NKNNYY--SLIIHKNHLXRNLITFFNKVSRRWNKSKNK 313
            S+Y  ++C+ Y   N+  K  YY   +I H  H  +  IT   K+   +N  K+K
Sbjct: 1599 SSYGEEICNFYEPLNLKGKVEYYLNDIISHIKHTLKYYITNLFKMKNIYNNEKDK 1653


>UniRef50_Q22AB7 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1293

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 23/82 (28%), Positives = 39/82 (47%)
 Frame = +2

Query: 68  SWNSYPPHAFNHTIQN*LEME*F*TYXMYSNYLHKLCHXYHQTNI*NKNNYYSLIIHKNH 247
           S+N+ P   FN  I +  E+          +Y + + +  H  NI   NN YS+    N 
Sbjct: 69  SYNNQPVPQFNKEINSSKEL--------IPSYFNNISNNNHINNI---NNSYSIKDQSNK 117

Query: 248 LXRNLITFFNKVSRRWNKSKNK 313
           +  NL+  FNK++ + N S+ +
Sbjct: 118 VAANLVNSFNKLNTQVNDSQQQ 139


>UniRef50_Q4YAD4 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 883

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +2

Query: 194 TNI*NKNNYYSLIIHKNHLXR-NLITFFNKVSRRWNKSKN 310
           TNI ++N YY+  I+KN L + +LI+  NK     +K KN
Sbjct: 109 TNIQSENKYYTYFIYKNILSKIDLISDMNKKKIDKDKEKN 148


>UniRef50_Q61ML7 Cluster: Putative uncharacterized protein CBG08432;
           n=1; Caenorhabditis briggsae|Rep: Putative
           uncharacterized protein CBG08432 - Caenorhabditis
           briggsae
          Length = 446

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = +3

Query: 21  YLYDSFTYI*LPLRKHRGILTHPTPS 98
           Y YD FTY  +  RK   I TH TPS
Sbjct: 170 YTYDGFTYRVVNFRKEFRIFTHNTPS 195


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,343,827
Number of Sequences: 1657284
Number of extensions: 3183954
Number of successful extensions: 5968
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5962
length of database: 575,637,011
effective HSP length: 83
effective length of database: 438,082,439
effective search space used: 10075896097
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)