Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0486
         (321 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70684-5|CAA94600.1|  233|Caenorhabditis elegans Hypothetical pr...    29   0.99 
Z70684-3|CAA94598.1|  233|Caenorhabditis elegans Hypothetical pr...    29   0.99 
Z81512-4|CAB04170.1|  550|Caenorhabditis elegans Hypothetical pr...    25   9.2  
Z35641-1|CAA84706.2|  863|Caenorhabditis elegans Hypothetical pr...    25   9.2  
AC006722-4|AAK68419.2|  279|Caenorhabditis elegans Hypothetical ...    25   9.2  
AC006645-9|AAF39841.2|  293|Caenorhabditis elegans Nematode asta...    25   9.2  

>Z70684-5|CAA94600.1|  233|Caenorhabditis elegans Hypothetical
           protein F28D1.5 protein.
          Length = 233

 Score = 28.7 bits (61), Expect = 0.99
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = -1

Query: 99  LKAWGG*EFHDVSLM 55
           LKAWGG +F+DVSL+
Sbjct: 107 LKAWGGQDFYDVSLV 121


>Z70684-3|CAA94598.1|  233|Caenorhabditis elegans Hypothetical
           protein F28D1.3 protein.
          Length = 233

 Score = 28.7 bits (61), Expect = 0.99
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = -1

Query: 99  LKAWGG*EFHDVSLM 55
           LKAWGG +F+DVSL+
Sbjct: 107 LKAWGGQDFYDVSLV 121


>Z81512-4|CAB04170.1|  550|Caenorhabditis elegans Hypothetical
           protein F25C8.4 protein.
          Length = 550

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 63  KHRGILTHPTPSIILYKTN*KWNNSKH 143
           K +GI+T  T  +++ KT   WN SKH
Sbjct: 190 KRKGIVT--THKVMVAKTMVMWNTSKH 214


>Z35641-1|CAA84706.2|  863|Caenorhabditis elegans Hypothetical
           protein C38H2.1 protein.
          Length = 863

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +2

Query: 215 NYYSLIIHKNHLXRNLITFFNKVSRRWNKSK 307
           NY+ ++I  N    ++I FFN+++ R + S+
Sbjct: 813 NYHDVLITNNFDYTDMIKFFNEMAERHDCSR 843


>AC006722-4|AAK68419.2|  279|Caenorhabditis elegans Hypothetical
          protein Y19D10A.6 protein.
          Length = 279

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 36 FTYI*LPLRKHRGILTHP 89
          + +I +PLRK RGI  HP
Sbjct: 42 YGHINIPLRKKRGIALHP 59


>AC006645-9|AAF39841.2|  293|Caenorhabditis elegans Nematode astacin
           protease protein 2 protein.
          Length = 293

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 36  FTYI*LPLRKHRGILTHP 89
           + +I +PLRK RGI  HP
Sbjct: 56  YGHINIPLRKKRGIALHP 73


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,408,877
Number of Sequences: 27780
Number of extensions: 77190
Number of successful extensions: 113
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 113
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 376873630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)