Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0480
         (514 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0594 + 25349612-25352530                                         28   3.8  
11_06_0567 - 25038537-25038957,25039059-25039252                       28   5.1  
01_06_0495 - 29779499-29781325                                         28   5.1  
11_06_0667 + 26071774-26072070,26072352-26073153,26073209-260734...    27   8.8  
04_04_0415 + 25038826-25038835,25039333-25039964,25040484-250405...    27   8.8  
03_06_0642 + 35239658-35240083,35240167-35240238,35240305-352409...    27   8.8  

>11_06_0594 + 25349612-25352530
          Length = 972

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -1

Query: 268 AICFCLSVHFAQWVSKASGILSLIF 194
           ++CFC  +H + W+S A  +L+  +
Sbjct: 426 SLCFCSPLHLSSWLSNAEKMLTFCY 450


>11_06_0567 - 25038537-25038957,25039059-25039252
          Length = 204

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -1

Query: 283 CASCFAICFCLSVHFAQWVSKASGILSLI 197
           C +  A  FC  VH A +VS A+G+  L+
Sbjct: 135 CTTAAAGNFCNQVHIAMYVSLAAGVALLV 163


>01_06_0495 - 29779499-29781325
          Length = 608

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +3

Query: 198 IKDKIP-EALETHCAKCTDKQKQMAKQLAQGIKKTHPELWDEFITFYDPQGKYQTSFKDF 374
           +KD IP   L T  +K  D  K  A++L  G+ +     W+  I  Y   G+YQ + + F
Sbjct: 148 VKDPIPMNCLITGYSKSGDVVK--ARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLF 205


>11_06_0667 +
           26071774-26072070,26072352-26073153,26073209-26073411,
           26075078-26075521,26075703-26075758,26076323-26076402,
           26077098-26077174,26077279-26078301
          Length = 993

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +3

Query: 231 HCAKCTDKQKQMAKQLAQGIKKTHPELWDEFITFYDPQGKYQTSFKDF 374
           H  + +D ++   KQ    +   +   +D F+T YD    YQ S ++F
Sbjct: 146 HMGRLSDGREVAIKQFHDDLS-IYASKYDPFVTHYDHDEFYQRSIEEF 192


>04_04_0415 +
           25038826-25038835,25039333-25039964,25040484-25040561,
           25040588-25040833,25041598-25041684,25041860-25042024
          Length = 405

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 293 EDTPGVMGRVHYFLRPSR 346
           ED  G+  + HYF+RPSR
Sbjct: 158 EDVLGLFRKFHYFVRPSR 175


>03_06_0642 +
           35239658-35240083,35240167-35240238,35240305-35240919,
           35241253-35241435,35241604-35241663,35241733-35241936,
           35242497-35242745,35243609-35243707,35243760-35243858,
           35244463-35244480,35244668-35244862,35244981-35245073,
           35245265-35245531,35245884-35246102
          Length = 932

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = -1

Query: 118 TSEASKLSSIGSYLS*ASTAKNRPRKTNSSFILKFSTRF 2
           T  +  +SSI SY S  ST++NR  K N S +L  ST +
Sbjct: 181 TESSMDMSSILSYQSNNSTSQNRGLK-NFSLLLSLSTLY 218


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,332,341
Number of Sequences: 37544
Number of extensions: 202615
Number of successful extensions: 510
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 510
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1106928780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)