Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0480
(514 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28166| Best HMM Match : Borrelia_orfA (HMM E-Value=2.1) 33 0.18
SB_27782| Best HMM Match : Borrelia_orfA (HMM E-Value=0.1) 32 0.24
SB_57306| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.24
SB_58198| Best HMM Match : Exo_endo_phos (HMM E-Value=0.012) 29 1.7
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_35399| Best HMM Match : BCL_N (HMM E-Value=7) 29 1.7
SB_21743| Best HMM Match : rve (HMM E-Value=4e-17) 29 1.7
SB_28180| Best HMM Match : Ank (HMM E-Value=1.5e-15) 29 3.0
SB_563| Best HMM Match : Ank (HMM E-Value=0) 29 3.0
SB_9076| Best HMM Match : Gas_vesicle_C (HMM E-Value=0.9) 29 3.0
SB_5854| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.3e-17) 28 3.9
SB_36664| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_58663| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_57881| Best HMM Match : FeoB_C (HMM E-Value=3.7) 27 9.1
SB_28962| Best HMM Match : F-box (HMM E-Value=6.3e-10) 27 9.1
>SB_28166| Best HMM Match : Borrelia_orfA (HMM E-Value=2.1)
Length = 279
Score = 32.7 bits (71), Expect = 0.18
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +1
Query: 127 TKGFLSRTLSVY*IKGPALQN*RKLKIK--FQKLWRPIVRNVLINRSRWRNNLRKELRRH 300
T L+RTL Y P + RK + R + L+ R+ + N L R
Sbjct: 124 TSSLLTRTLRKYNTSSPLTRTLRKYNTSSLLTRTLRKYNTSSLLTRTLRKYNTSSLLTRT 183
Query: 301 TRSYGTSSLLFTTLKE 348
R Y TSSLL TL++
Sbjct: 184 LRKYNTSSLLTRTLRK 199
Score = 28.3 bits (60), Expect = 3.9
Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 2/95 (2%)
Frame = +1
Query: 73 KTNTNQSMTALMLLKS*VTKGFLSRTLSVY*IKGPALQN*RKLKIK--FQKLWRPIVRNV 246
K NT+ +T L+ T L+RTL Y + RK + R
Sbjct: 160 KYNTSSLLTRT--LRKYNTSSLLTRTLRKYNTSSLLTRTLRKYNTSSLLTRALRKDKTGS 217
Query: 247 LINRSRWRNNLRKELRRHTRSYGTSSLLFTTLKEN 351
L+ R+ + L R R Y TSSLL TL+++
Sbjct: 218 LLTRTLRKYKTSSPLTRALRKYSTSSLLTRTLRKH 252
Score = 27.9 bits (59), Expect = 5.2
Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Frame = +1
Query: 73 KTNTNQSMTALMLLKS*VTKGFLSRTLSVY*IKGPALQN*RKLKIK--FQKLWRPIVRNV 246
K NT+ +T L+ T L+RT Y + RK + R +
Sbjct: 95 KYNTSSLLTRT--LRKYNTSSLLTRTSRKYNTSSLLTRTLRKYNTSSPLTRTLRKYNTSS 152
Query: 247 LINRSRWRNNLRKELRRHTRSYGTSSLLFTTLKE 348
L+ R+ + N L R R Y TSSLL TL++
Sbjct: 153 LLTRTLRKYNTSSLLTRTLRKYNTSSLLTRTLRK 186
Score = 27.5 bits (58), Expect = 6.9
Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Frame = +1
Query: 127 TKGFLSRTLSVY*IKGPALQN*RKLKIK--FQKLWRPIVRNVLINRSRWRNNLRKELRRH 300
T L+RT Y + RK + R + L+ R+ + N L R
Sbjct: 85 TSSLLTRTFRKYNTSSLLTRTLRKYNTSSLLTRTSRKYNTSSLLTRTLRKYNTSSPLTRT 144
Query: 301 TRSYGTSSLLFTTLKE 348
R Y TSSLL TL++
Sbjct: 145 LRKYNTSSLLTRTLRK 160
>SB_27782| Best HMM Match : Borrelia_orfA (HMM E-Value=0.1)
Length = 633
Score = 32.3 bits (70), Expect = 0.24
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +1
Query: 127 TKGFLSRTLSVY*IKGPALQN*RKLKIK--FQKLWRPIVRNVLINRSRWRNNLRKELRRH 300
T L+RTL Y P + RK + R + L+ R+ + N L R
Sbjct: 478 TSSLLTRTLRKYNTSSPLTRTLRKYNTSSLLTRTSRKYNTSSLLTRTLRKYNTSSLLTRT 537
Query: 301 TRSYGTSSLLFTTLKE 348
R Y TSSLL TL++
Sbjct: 538 LRKYNTSSLLTRTLRK 553
Score = 31.1 bits (67), Expect = 0.56
Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Frame = +1
Query: 73 KTNTNQSMTALMLLKS*VTKGFLSRTLSVY*IKGPALQN*RKLKIK--FQKLWRPIVRNV 246
K NT+ +T M + T L+RTL Y + RK + R +
Sbjct: 263 KHNTSSLLTRTMRKHN--TSSLLTRTLRKYNTSSLLTRTMRKYNTSSLLTRTMRKHNTSS 320
Query: 247 LINRSRWRNNLRKELRRHTRSYGTSSLLFTTLKE 348
L+ R+ + N L R R Y TSSLL TL++
Sbjct: 321 LLTRTMRKYNTSSLLTRTLRKYNTSSLLTRTLRK 354
Score = 30.7 bits (66), Expect = 0.74
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Frame = +1
Query: 73 KTNTNQSMTALMLLKS*VTKGFLSRTLSVY*IKGPALQN*RKLKIKF--QKLWRPIVRNV 246
K NT+ +T L+ T L+RTL + + RK F + R +
Sbjct: 172 KHNTSSLLTRT--LRKYKTSSLLTRTLRKHNTSSLLTRTLRKYNTSFLLTRTSRKYNTSS 229
Query: 247 LINRSRWRNNLRKELRRHTRSYGTSSLLFTTLKEN 351
L+ R+ ++N L R R Y TSSLL T +++
Sbjct: 230 LLTRALRKHNTSSLLTRTLRKYNTSSLLTRTFRKH 264
Score = 29.1 bits (62), Expect = 2.2
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = +1
Query: 127 TKGFLSRTLSVY*IKGPALQN*RKLKIK--FQKLWRPIVRNVLINRSRWRNNLRKELRRH 300
T L+RTL Y + RK + R + L+ R+ ++N L R
Sbjct: 123 TSSLLTRTLRKYNTSSLLTRTLRKYNTSSPLTRTSRKYNTSSLLTRALRKHNTSSLLTRT 182
Query: 301 TRSYGTSSLLFTTLKEN 351
R Y TSSLL TL+++
Sbjct: 183 LRKYKTSSLLTRTLRKH 199
Score = 29.1 bits (62), Expect = 2.2
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Frame = +1
Query: 73 KTNTNQSMTALMLLKS*VTKGFLSRTLSVY*IKGPALQN*RKLKIK--FQKLWRPIVRNV 246
K NT+ +T L+ T L+RT+ Y + RK + R +
Sbjct: 276 KHNTSSLLTRT--LRKYNTSSLLTRTMRKYNTSSLLTRTMRKHNTSSLLTRTMRKYNTSS 333
Query: 247 LINRSRWRNNLRKELRRHTRSYGTSSLLFTTLKE 348
L+ R+ + N L R R Y TSSLL TL++
Sbjct: 334 LLTRTLRKYNTSSLLTRTLRKYNTSSLLTRTLRK 367
Score = 28.7 bits (61), Expect = 3.0
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Frame = +1
Query: 73 KTNTNQSMTALMLLKS*VTKGFLSRTLSVY*IKGPALQN*RKLKIK--FQKLWRPIVRNV 246
K NT+ +T L+ T L+RTL Y + RK + R +
Sbjct: 224 KYNTSSLLTRA--LRKHNTSSLLTRTLRKYNTSSLLTRTFRKHNTSSLLTRTMRKHNTSS 281
Query: 247 LINRSRWRNNLRKELRRHTRSYGTSSLLFTTLKEN 351
L+ R+ + N L R R Y TSSLL T++++
Sbjct: 282 LLTRTLRKYNTSSLLTRTMRKYNTSSLLTRTMRKH 316
Score = 28.3 bits (60), Expect = 3.9
Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Frame = +1
Query: 73 KTNTNQSMTALMLLKS*VTKGFLSRTLSVY*IKGPALQN*RKLKIK--FQKLWRPIVRNV 246
K NT+ +T L+ T L+RT Y + RK + R +
Sbjct: 55 KYNTSSLLTRT--LRKYNTSSLLTRTSRKYNTSSLLTRTLRKYNTSSPLTRTLRKYNTSS 112
Query: 247 LINRSRWRNNLRKELRRHTRSYGTSSLLFTTLKE 348
L+ R+ + N L R R Y TSSLL TL++
Sbjct: 113 LLTRTSRKYNTSSLLTRTLRKYNTSSLLTRTLRK 146
Score = 28.3 bits (60), Expect = 3.9
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Frame = +1
Query: 73 KTNTNQSMTALMLLKS*VTKGFLSRTLSVY*IKGPALQN*RKLKIK--FQKLWRPIVRNV 246
K NT+ +T + T L+RT+ + + RK + R +
Sbjct: 250 KYNTSSLLTRTFRKHN--TSSLLTRTMRKHNTSSLLTRTLRKYNTSSLLTRTMRKYNTSS 307
Query: 247 LINRSRWRNNLRKELRRHTRSYGTSSLLFTTLKE 348
L+ R+ ++N L R R Y TSSLL TL++
Sbjct: 308 LLTRTMRKHNTSSLLTRTMRKYNTSSLLTRTLRK 341
Score = 28.3 bits (60), Expect = 3.9
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Frame = +1
Query: 73 KTNTNQSMTALMLLKS*VTKGFLSRTLSVY*IKGPALQN*RKLKIKFQ------KLWRPI 234
K NT+ +T L+ T L+RT+ Y + RK K + R
Sbjct: 354 KYNTSSLLTRT--LRKYYTSSLLTRTMRKYNTSSLLTRTLRKTMRKHNTSSLLTRTSRKY 411
Query: 235 VRNVLINRSRWRNNLRKELRRHTRSYGTSSLLFTTLKE 348
++ L+ R+ + N L R +R Y TSSLL T ++
Sbjct: 412 NKSSLLTRTSRKYNTSSLLTRTSRKYNTSSLLTRTFRK 449
Score = 28.3 bits (60), Expect = 3.9
Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Frame = +1
Query: 73 KTNTNQSMTALMLLKS*VTKGFLSRTLSVY*IKGPALQN*RKLKIK--FQKLWRPIVRNV 246
K NT+ +T L+ T L+RT Y + RK + R +
Sbjct: 449 KYNTSSLLTRT--LRKYNTSSLLTRTSRKYNTSSLLTRTLRKYNTSSPLTRTLRKYNTSS 506
Query: 247 LINRSRWRNNLRKELRRHTRSYGTSSLLFTTLKE 348
L+ R+ + N L R R Y TSSLL TL++
Sbjct: 507 LLTRTSRKYNTSSLLTRTLRKYNTSSLLTRTLRK 540
Score = 28.3 bits (60), Expect = 3.9
Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 2/95 (2%)
Frame = +1
Query: 73 KTNTNQSMTALMLLKS*VTKGFLSRTLSVY*IKGPALQN*RKLKIK--FQKLWRPIVRNV 246
K NT+ +T L+ T L+RTL Y + RK + R
Sbjct: 514 KYNTSSLLTRT--LRKYNTSSLLTRTLRKYNTSSLLTRTLRKYNTSSLLTRALRKDKTGS 571
Query: 247 LINRSRWRNNLRKELRRHTRSYGTSSLLFTTLKEN 351
L+ R+ + L R R Y TSSLL TL+++
Sbjct: 572 LLTRTLRKYKTSSPLTRALRKYSTSSLLTRTLRKH 606
>SB_57306| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 212
Score = 32.3 bits (70), Expect = 0.24
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Frame = +1
Query: 73 KTNTNQSMTALMLLKS*VTKGFLSRTLSVY*IKGPALQN*RKLKIK--FQKLWRPIVRNV 246
K NT+ +T L+ T L+RTL Y + RK + R +
Sbjct: 30 KYNTSSLLTRT--LRKHNTSSLLTRTLRKYYTSSLLTRTLRKYNTSSLLTRTSRKYNTSS 87
Query: 247 LINRSRWRNNLRKELRRHTRSYGTSSLLFTTLKE 348
L+ R+ + N R L R R Y TSSLL TL++
Sbjct: 88 LLTRTLRKYNTRSLLTRTLRKYNTSSLLTRTLRK 121
Score = 31.1 bits (67), Expect = 0.56
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Frame = +1
Query: 73 KTNTNQSMTALMLLKS*VTKGFLSRTLSVY*IKGPALQN*RKLKIK--FQKLWRPIVRNV 246
K NT+ +T L+ T+ L+RTL Y + RK + R +
Sbjct: 82 KYNTSSLLTRT--LRKYNTRSLLTRTLRKYNTSSLLTRTLRKYNTSSLLTRTLRKYNTSS 139
Query: 247 LINRSRWRNNLRKELRRHTRSYGTSSLLFTTLKE 348
L+ R+ + N L R R Y TSSLL TL++
Sbjct: 140 LLTRTLRKYNTSSLLTRTLRKYNTSSLLTRTLRK 173
Score = 30.7 bits (66), Expect = 0.74
Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Frame = +1
Query: 73 KTNTNQSMTALMLLKS*VTKGFLSRTLSVY*IKGPALQN*RKLKIK--FQKLWRPIVRNV 246
K NT+ +T L+ T L+RTL Y + RK + R
Sbjct: 43 KHNTSSLLTRT--LRKYYTSSLLTRTLRKYNTSSLLTRTSRKYNTSSLLTRTLRKYNTRS 100
Query: 247 LINRSRWRNNLRKELRRHTRSYGTSSLLFTTLKE 348
L+ R+ + N L R R Y TSSLL TL++
Sbjct: 101 LLTRTLRKYNTSSLLTRTLRKYNTSSLLTRTLRK 134
Score = 30.3 bits (65), Expect = 0.97
Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Frame = +1
Query: 73 KTNTNQSMTALMLLKS*VTKGFLSRTLSVY*IKGPALQN*RKLKIK--FQKLWRPIVRNV 246
K NT+ +T L+ T L+RTL Y + RK + R +
Sbjct: 108 KYNTSSLLTRT--LRKYNTSSLLTRTLRKYNTSSLLTRTLRKYNTSSLLTRTLRKYNTSS 165
Query: 247 LINRSRWRNNLRKELRRHTRSYGTSSLLFTTLKE 348
L+ R+ + N L R R Y TSSLL TL++
Sbjct: 166 LLTRTLRKYNTSSLLTRTLRKYNTSSLLTRTLRK 199
Score = 29.9 bits (64), Expect = 1.3
Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Frame = +1
Query: 73 KTNTNQSMTALMLLKS*VTKGFLSRTLSVY*IKGPALQN*RKLKIK--FQKLWRPIVRNV 246
K NT +T L+ T L+RTL Y + RK + R +
Sbjct: 95 KYNTRSLLTRT--LRKYNTSSLLTRTLRKYNTSSLLTRTLRKYNTSSLLTRTLRKYNTSS 152
Query: 247 LINRSRWRNNLRKELRRHTRSYGTSSLLFTTLKE 348
L+ R+ + N L R R Y TSSLL TL++
Sbjct: 153 LLTRTLRKYNTSSLLTRTLRKYNTSSLLTRTLRK 186
Score = 29.9 bits (64), Expect = 1.3
Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Frame = +1
Query: 73 KTNTNQSMTALMLLKS*VTKGFLSRTLSVY*IKGPALQN*RKLKIK--FQKLWRPIVRNV 246
K NT+ +T L+ T L+RTL Y + RK + R +
Sbjct: 121 KYNTSSLLTRT--LRKYNTSSLLTRTLRKYNTSSLLTRTLRKYNTSSLLTRTLRKYNTSS 178
Query: 247 LINRSRWRNNLRKELRRHTRSYGTSSLLFTTLK 345
L+ R+ + N L R R Y TSSLL TL+
Sbjct: 179 LLTRTLRKYNTSSLLTRTLRKYNTSSLLTRTLR 211
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +1
Query: 232 IVRNVLINRSRWRNNLRKELRRHTRSYGTSSLLFTTLKEN 351
++ + NR+ + N L R +R Y TSSLL TL+++
Sbjct: 5 VLHKLPANRTLRKYNTSSLLTRTSRKYNTSSLLTRTLRKH 44
Score = 27.1 bits (57), Expect = 9.1
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = +1
Query: 127 TKGFLSRTLSVY*IKGPALQN*RKLKIK--FQKLWRPIVRNVLINRSRWRNNLRKELRRH 300
T L+RT Y + RK + + R + L+ R+ + N L R
Sbjct: 72 TSSLLTRTSRKYNTSSLLTRTLRKYNTRSLLTRTLRKYNTSSLLTRTLRKYNTSSLLTRT 131
Query: 301 TRSYGTSSLLFTTLKE 348
R Y TSSLL TL++
Sbjct: 132 LRKYNTSSLLTRTLRK 147
>SB_58198| Best HMM Match : Exo_endo_phos (HMM E-Value=0.012)
Length = 816
Score = 29.5 bits (63), Expect = 1.7
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Frame = -3
Query: 422 YLLNKLKYCFIYL-----RLKKIFERSLIFSLRVVKSNELVP*LRVCL-LNSLRKL---- 273
Y+L L+YC L K E+S +SLR + + CL ++++RKL
Sbjct: 725 YVLPHLEYCCPLLLGATKTQKDRLEKSNYYSLRTLLNLGRSSSYENCLVISNMRKLEHRR 784
Query: 272 -FRHLLLFISTFRTMGLQSFWNFIFNFLQFCS 180
+ LLLF ++R NF F FCS
Sbjct: 785 QVQALLLFFKSYRMQQATYIANFFVQFALFCS 816
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 162 LNQGPCTAELKKIKDKIPEALETHCAKCTDKQKQMAKQLAQGIKK 296
L++GP EL+K DK+ EA T K K++++ ++ + KK
Sbjct: 3578 LDEGPQREELQKEVDKLHEAWSTLVRKARGKRRKLQRRGSSAEKK 3622
>SB_35399| Best HMM Match : BCL_N (HMM E-Value=7)
Length = 182
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Frame = +3
Query: 192 KKIKDKIPE----ALETHCAKCTDKQKQMAKQLAQGIKKTHPE 308
+K KDKIP+ A + H D++++ A+ A+ IKK+HPE
Sbjct: 83 RKNKDKIPDKSLRAFKQH--PVIDQEERSAEPAAKKIKKSHPE 123
>SB_21743| Best HMM Match : rve (HMM E-Value=4e-17)
Length = 865
Score = 29.5 bits (63), Expect = 1.7
Identities = 21/77 (27%), Positives = 34/77 (44%)
Frame = +3
Query: 90 IDDSFDASEVLSNERLLKSYTKCLLNQGPCTAELKKIKDKIPEALETHCAKCTDKQKQMA 269
+DD + EV + S + L+N PCT +L K++ + AK +
Sbjct: 310 LDDCYFMGEVSTTNDEFWS-AEVLINHNPCTLKLDKLQRF--NGMVNQLAKFIPDLATIN 366
Query: 270 KQLAQGIKKTHPELWDE 320
+ L Q +KK LWD+
Sbjct: 367 EPLRQLLKKEQQWLWDQ 383
>SB_28180| Best HMM Match : Ank (HMM E-Value=1.5e-15)
Length = 211
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 129 ERLLKSYTKCLLNQGPCTAELKKIKDKIPEALETHCAKC 245
E +LK+ T L QG T ++K+ DK+P+ E KC
Sbjct: 121 EDVLKNKT---LEQGTVTTPMRKLIDKLPDVAEAVLNKC 156
>SB_563| Best HMM Match : Ank (HMM E-Value=0)
Length = 753
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 129 ERLLKSYTKCLLNQGPCTAELKKIKDKIPEALETHCAKC 245
E +LK+ T L QG T ++K+ DK+P+ E KC
Sbjct: 499 EDVLKNKT---LEQGTVTTPMRKLIDKLPDVAEAVLNKC 534
>SB_9076| Best HMM Match : Gas_vesicle_C (HMM E-Value=0.9)
Length = 305
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/40 (27%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = +3
Query: 222 LETHCAKCTDKQKQMAK--QLAQGIKKTHPELWDEFITFY 335
+E AK + + +++ K +L++G+K + +WD+F ++Y
Sbjct: 112 MEQRVAKASQQIEELMKDFRLSEGLKTIYSLIWDDFCSWY 151
>SB_5854| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.3e-17)
Length = 1850
Score = 28.3 bits (60), Expect = 3.9
Identities = 13/52 (25%), Positives = 29/52 (55%)
Frame = +3
Query: 153 KCLLNQGPCTAELKKIKDKIPEALETHCAKCTDKQKQMAKQLAQGIKKTHPE 308
+ L N P AE+ K++DK+ E L+ H + + + + + + ++T+P+
Sbjct: 305 RTLGNLTPLDAEISKLRDKLLEMLKNHRYQKHNDLRHAMEFIIEVAERTYPD 356
>SB_36664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 725
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 237 AKCTDKQKQMAKQLAQGIKKTHPELWDEFITFYDPQGKYQTSFKD 371
A K+K K LA +KK P+++D+ TFY+ ++ K+
Sbjct: 56 ALTAQKEKDFLKVLAM-LKKKDPKIYDKDATFYESDDSSSSNDKE 99
>SB_58663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1008
Score = 27.5 bits (58), Expect = 6.9
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +3
Query: 72 QDKYEPIDDSFDASEVLSNERLLKSYTKCLLNQGPCTAELKKIKDKIPEALETHCAKCTD 251
+ K E S DA E+ +R L+ + L + DK+ +ALET +
Sbjct: 519 RQKAEEQKKSMDA-EIHELKRKLEQSEESLKESDAKFTKTNDELDKVKKALETTQESWKE 577
Query: 252 KQKQMAKQLAQ 284
K+ +MA +LAQ
Sbjct: 578 KETEMAAKLAQ 588
>SB_57881| Best HMM Match : FeoB_C (HMM E-Value=3.7)
Length = 162
Score = 27.1 bits (57), Expect = 9.1
Identities = 20/72 (27%), Positives = 36/72 (50%)
Frame = -3
Query: 341 RVVKSNELVP*LRVCLLNSLRKLFRHLLLFISTFRTMGLQSFWNFIFNFLQFCSAGPLIQ 162
+++ + +P R+ + L + L++F ST RT+ S N +NFL SA L
Sbjct: 78 KILSARFWIPLSRLTYMAYLVHIIVLLVIFTST-RTLFYYSDVNISWNFLSAVSAAYLCA 136
Query: 161 *TLSVRLKKPFV 126
+SV ++ P +
Sbjct: 137 FIVSVTIEMPMM 148
>SB_28962| Best HMM Match : F-box (HMM E-Value=6.3e-10)
Length = 447
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 111 SEVLSNERLLKSYTKCLLNQGPCTAELKKIKDKIPEALETHCAKCT 248
SE+L+++ LLK T C Q C E K K + +C T
Sbjct: 160 SEILNDDALLKISTNCPQLQSLCLNECKNFHGKHLRKVMENCPHIT 205
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,854,782
Number of Sequences: 59808
Number of extensions: 255536
Number of successful extensions: 821
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 799
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1136110413
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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