Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0478
         (712 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    23   2.5  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   2.5  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   3.2  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   3.2  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   3.2  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.9  

>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = -1

Query: 76  KLHIKDTRLKLRKKNETKG 20
           K+  ++ R+K +K+N+TKG
Sbjct: 287 KIWFQNRRMKWKKENKTKG 305


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = -1

Query: 76  KLHIKDTRLKLRKKNETKG 20
           K+  ++ R+K +K+N+TKG
Sbjct: 289 KIWFQNRRMKWKKENKTKG 307


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +3

Query: 585 VVHLT*FTKYITKIYRSYLVGARNIKLYLSHLTIESFTC 701
           V   T F K + + Y   +VG +N  L++  L   SF C
Sbjct: 120 VFFFTLFNKLLGQ-YPVGIVGVKNASLFIFDLIFLSFRC 157


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 567 IIIHRITYVTVVKIILHTALFFLSH 493
           I+IH    VT+V  +  T +FF S+
Sbjct: 144 ILIHLSGLVTIVATLTVTIIFFASY 168


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 567 IIIHRITYVTVVKIILHTALFFLSH 493
           I+IH    VT+V  +  T +FF S+
Sbjct: 144 ILIHLSGLVTIVATLTVTIIFFASY 168


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 13/51 (25%), Positives = 25/51 (49%)
 Frame = -1

Query: 346 SLLWFVYFILKTIQ*VKKKSEYSLQSMMATFMDNNKQKLIVHK*ANVSEEV 194
           +L WF + +L+  +  +K +   L S  A    N   KLI+    ++ E++
Sbjct: 567 TLGWFFWSLLRIYELARKAAFAHLNSNEARATLNWVSKLIIRSNPSLEEKL 617


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,404
Number of Sequences: 336
Number of extensions: 3114
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)