Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0478
         (712 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68214-1|CAA92444.1|  846|Caenorhabditis elegans Hypothetical pr...    25   8.1  

>Z68214-1|CAA92444.1|  846|Caenorhabditis elegans Hypothetical
           protein C10C5.1 protein.
          Length = 846

 Score = 25.4 bits (53), Expect(2) = 8.1
 Identities = 16/57 (28%), Positives = 28/57 (49%)
 Frame = -2

Query: 573 NFIIIHRITYVTVVKIILHTALFFLSHCFRL*LAI**SIVTSDKYSVYTSVT*FQCF 403
           NF++     YV +VK  L  +++FL+  F   ++   S  T  ++ VY  +  F  F
Sbjct: 190 NFVLFLFTAYVGIVKPSLSNSIYFLAFLF---ISTWWSTYTPLRHGVYNQIKKFLIF 243



 Score = 20.6 bits (41), Expect(2) = 8.1
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 654 SLRQLNNFYIFL 619
           SLR+L NF +FL
Sbjct: 184 SLRRLTNFVLFL 195


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,214,877
Number of Sequences: 27780
Number of extensions: 244899
Number of successful extensions: 538
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 538
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)