Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0476
         (781 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4RLZ5 Cluster: Chromosome 10 SCAF15019, whole genome s...    33   6.1  
UniRef50_A0E9I8 Cluster: Chromosome undetermined scaffold_84, wh...    33   6.1  
UniRef50_A6CJY1 Cluster: Sensory box/GGDEF family protein; n=1; ...    33   8.0  

>UniRef50_Q4RLZ5 Cluster: Chromosome 10 SCAF15019, whole genome
           shotgun sequence; n=3; Clupeocephala|Rep: Chromosome 10
           SCAF15019, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 680

 Score = 33.5 bits (73), Expect = 6.1
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -2

Query: 558 LYPVQLLNW*WRYIYSTFTLHNIRLPYSLLITCSF 454
           L+ V  L+W W  +   FTL+N+ +   LL+T SF
Sbjct: 133 LFAVSRLSWQWSVVAEVFTLNNLFVSLILLLTASF 167


>UniRef50_A0E9I8 Cluster: Chromosome undetermined scaffold_84, whole
            genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_84, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 1727

 Score = 33.5 bits (73), Expect = 6.1
 Identities = 19/52 (36%), Positives = 30/52 (57%)
 Frame = +2

Query: 323  IITYQLQMFSIIYEANVYKFFGLQIIPLRYFEFWKSFISNCECKNEHVISKE 478
            +I+Y LQ F+++Y  NV  +F  Q+     F+F KS ++  +  N HV S E
Sbjct: 1320 LISY-LQFFNVLYPYNVDTYF--QLFDFAQFDFIKSVVNIEDIINNHVTSPE 1368


>UniRef50_A6CJY1 Cluster: Sensory box/GGDEF family protein; n=1;
           Bacillus sp. SG-1|Rep: Sensory box/GGDEF family protein
           - Bacillus sp. SG-1
          Length = 656

 Score = 33.1 bits (72), Expect = 8.0
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -1

Query: 664 LLLLVCWSIVICIFLFSELCLVLIFHRMYN 575
           +LL   W I+IC+FLF+ L   L+F+ + N
Sbjct: 50  ILLQDTWYIIICLFLFTILAFSLVFYNLKN 79


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 736,871,062
Number of Sequences: 1657284
Number of extensions: 14581543
Number of successful extensions: 31892
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 30554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31877
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65850543200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)