Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0476
(781 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40539| Best HMM Match : DUF1613 (HMM E-Value=2.1) 29 5.6
SB_26401| Best HMM Match : DUF1613 (HMM E-Value=2) 29 5.6
SB_13514| Best HMM Match : DUF1613 (HMM E-Value=9.5) 29 5.6
SB_12448| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_57933| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_54334| Best HMM Match : DUF1613 (HMM E-Value=9.5) 29 5.6
SB_49623| Best HMM Match : DUF1613 (HMM E-Value=2.1) 29 5.6
SB_40655| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_35078| Best HMM Match : Dickkopf_N (HMM E-Value=5) 29 5.6
SB_33736| Best HMM Match : 7tm_1 (HMM E-Value=2.4e-35) 29 5.6
SB_19888| Best HMM Match : CagY_M (HMM E-Value=3.7) 29 5.6
SB_45713| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_54213| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
>SB_40539| Best HMM Match : DUF1613 (HMM E-Value=2.1)
Length = 235
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 374 YKFFGLQ-IIPLRYFEFWKSFISNCECKNEHVISKE 478
Y F L+ I+P R+++ W ++S C IS E
Sbjct: 151 YSLFALKGILPSRHYDLWSHYVSACRYMCSRSISPE 186
>SB_26401| Best HMM Match : DUF1613 (HMM E-Value=2)
Length = 345
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 374 YKFFGLQ-IIPLRYFEFWKSFISNCECKNEHVISKE 478
Y F L+ I+P R+++ W ++S C IS E
Sbjct: 148 YSLFALKGILPSRHYDLWSHYVSACRYMCSRSISPE 183
>SB_13514| Best HMM Match : DUF1613 (HMM E-Value=9.5)
Length = 207
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 374 YKFFGLQ-IIPLRYFEFWKSFISNCECKNEHVISKE 478
Y F L+ I+P R+++ W ++S C IS E
Sbjct: 151 YSLFALKGILPSRHYDLWSHYVSACRYMCSRSISPE 186
>SB_12448| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1300
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -1
Query: 382 KFIDIRLIDYTEHLKLVSYDDNFFPSFHDTLCSWNLQA*KH 260
KF DI +++H LVS F P LC WN + K+
Sbjct: 446 KFNDIPAEAHSDHFDLVSRRMGFIPLPLGALCKWNKENIKY 486
>SB_57933| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 374 YKFFGLQ-IIPLRYFEFWKSFISNCECKNEHVISKE 478
Y F L+ I+P R+++ W ++S C IS E
Sbjct: 69 YSLFALKGILPSRHYDLWSHYVSACRYMCSRSISPE 104
>SB_54334| Best HMM Match : DUF1613 (HMM E-Value=9.5)
Length = 206
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 374 YKFFGLQ-IIPLRYFEFWKSFISNCECKNEHVISKE 478
Y F L+ I+P R+++ W ++S C IS E
Sbjct: 150 YSLFALKGILPSRHYDLWSHYVSACRYMCSRSISPE 185
>SB_49623| Best HMM Match : DUF1613 (HMM E-Value=2.1)
Length = 680
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 374 YKFFGLQ-IIPLRYFEFWKSFISNCECKNEHVISKE 478
Y F L+ I+P R+++ W ++S C IS E
Sbjct: 109 YSLFALKGILPSRHYDLWSHYVSACRYMCSRSISPE 144
>SB_40655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1074
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = -1
Query: 643 SIVICIFLFSELCLVLIFHRM---YNQMFVRSVPSSTP 539
+I CI + S+ CL+L+FH + Y ++ RS +P
Sbjct: 175 NIKYCILIISKFCLLLVFHELLIGYACVYFRSFHIDSP 212
>SB_35078| Best HMM Match : Dickkopf_N (HMM E-Value=5)
Length = 248
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 374 YKFFGLQ-IIPLRYFEFWKSFISNCECKNEHVISKE 478
Y F L+ I+P R+++ W ++S C IS E
Sbjct: 142 YSLFALKGILPSRHYDLWSHYVSACRYMCSRSISPE 177
>SB_33736| Best HMM Match : 7tm_1 (HMM E-Value=2.4e-35)
Length = 368
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/64 (23%), Positives = 33/64 (51%)
Frame = -1
Query: 733 TFFMAANCMKGVCDKIIPLFTHMLLLLVCWSIVICIFLFSELCLVLIFHRMYNQMFVRSV 554
T F +A+ +K C + +F + +C+ I +C+ F+ + ++ R NQ+ +S+
Sbjct: 173 TNFNSADPIKVTCALVYNIFG----IAICFVIPLCVMAFTYYRMFMVIRRQINQIKKQSL 228
Query: 553 PSST 542
S +
Sbjct: 229 ASES 232
>SB_19888| Best HMM Match : CagY_M (HMM E-Value=3.7)
Length = 389
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 374 YKFFGLQ-IIPLRYFEFWKSFISNCECKNEHVISKE 478
Y F L+ I+P R+++ W ++S C IS E
Sbjct: 283 YSLFALKGILPSRHYDLWSHYVSACRYMCSRSISPE 318
>SB_45713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 702
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 214 IANMSLKPHSFSPLNRVFKLVNSKSIRC 297
+AN +L P ++ LN+ FK+V K +C
Sbjct: 292 MANSALNPIAYGTLNKEFKMVFKKFFKC 319
>SB_54213| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -1
Query: 673 THMLLLLVCWSIVICIFLFSELCLVLIFHRMYNQM 569
+H+L+LLV W IV C +F+ + LV + + QM
Sbjct: 7 SHLLVLLVIWIIVWCFTVFNPI-LVPFDLKQHGQM 40
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,127,075
Number of Sequences: 59808
Number of extensions: 465541
Number of successful extensions: 913
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2131907602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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