Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0476
         (781 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    24   6.1  
AY193727-1|AAO24698.1|  492|Anopheles gambiae cytochrome P450 pr...    24   6.1  
AF487780-1|AAL96667.1|  490|Anopheles gambiae cytochrome P450 CY...    24   6.1  

>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +1

Query: 238 HSFSPLNRVFKLVNSKSIRCHENLEKNYHHNLPTSNVQYNL 360
           H  S L R   L++   +  H++     HHN P S + +NL
Sbjct: 437 HHHSALVRGMDLMDDMPLPYHDH----NHHNSPMSPINFNL 473


>AY193727-1|AAO24698.1|  492|Anopheles gambiae cytochrome P450
           protein.
          Length = 492

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -2

Query: 477 SLLITCSFLHSQLLINDFQNSK*RNGIICKPKN 379
           ++LI    L  ++++NDFQN   R G+ C  ++
Sbjct: 76  AILIRDPHLAKRIMVNDFQNFHDR-GVYCNEEH 107


>AF487780-1|AAL96667.1|  490|Anopheles gambiae cytochrome P450
           CYP6Z2 protein protein.
          Length = 490

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -2

Query: 477 SLLITCSFLHSQLLINDFQNSK*RNGIICKPKN 379
           ++LI    L  ++++NDFQN   R G+ C  ++
Sbjct: 76  AILIRDPHLAKRIMVNDFQNFHDR-GVYCNEEH 107


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 799,890
Number of Sequences: 2352
Number of extensions: 16117
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)