Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0476
         (781 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64835-6|AAG24199.1|  341|Caenorhabditis elegans Serpentine rece...    29   2.8  
AF043700-1|AAB97571.2|  328|Caenorhabditis elegans Hypothetical ...    28   8.6  
AC024869-1|AAK68604.2|  357|Caenorhabditis elegans Hypothetical ...    28   8.6  

>U64835-6|AAG24199.1|  341|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 9 protein.
          Length = 341

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = -1

Query: 676 FTHMLLLLVCWSIVICIFLFSELCLVLIFHRMYNQMFVRSVPSSTPKLVM 527
           F H  L    WS ++ +F+ S   L+L F   Y    + S P ST K+ M
Sbjct: 82  FGHPFLCYASWSALLHLFIHSMWSLLLSF--AYRNYILSSAPPSTWKVFM 129


>AF043700-1|AAB97571.2|  328|Caenorhabditis elegans Hypothetical
           protein K09H9.4 protein.
          Length = 328

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -1

Query: 661 LLLVCWSIVICIFLFSELCLVLIFHRMY 578
           +  VC+SI IC FL S L L L+   +Y
Sbjct: 1   MFAVCFSIFICFFLSSFLFLTLVNECIY 28


>AC024869-1|AAK68604.2|  357|Caenorhabditis elegans Hypothetical
           protein Y75B7AL.2 protein.
          Length = 357

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -3

Query: 659 TFSLLVYCNLYFLIL*AMLGINFPQNVQSNV 567
           T S +V C +YF IL A++G+   QNV+  V
Sbjct: 202 TLSKVVACLIYFSILAALVGMYAYQNVELRV 232


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,764,598
Number of Sequences: 27780
Number of extensions: 379165
Number of successful extensions: 910
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 910
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)