Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0475
         (827 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_7192| Best HMM Match : No HMM Matches (HMM E-Value=.)               30   2.0  
SB_49942| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.6  
SB_36498| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-14)                 29   6.1  
SB_24408| Best HMM Match : 7tm_1 (HMM E-Value=3.1e-17)                 29   6.1  

>SB_7192| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 226

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +3

Query: 651 IDNYGPLESLIQHLLKVFSIKK*IITPQTDSPF 749
           +D  GP E     L K+F  +K ++TP+ D+ F
Sbjct: 118 VDTVGPAEKYQDKLQKIFPEQKIVVTPKADAKF 150


>SB_49942| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 123

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +1

Query: 76  FKLQHLYD*SRFRLDIFLKAIYL*APRLIKHHYPHILKLI-YNFSYHR 216
           + L+H Y+  + RL++ L  ++L   R  +H Y  + +L   + +YHR
Sbjct: 74  YTLKHAYEVRQIRLELCLHNVFLSLNRKARHSYRKLFQLARESTTYHR 121


>SB_36498| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-14)
          Length = 596

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 17/63 (26%), Positives = 34/63 (53%)
 Frame = +2

Query: 413 TSAITRSRRHFVNKVRSARARMLME*VCLHRRIVAHISIS*FINWSYYFIVFLIMFHYFN 592
           T  + RSR   +N    AR R+  + + +   IV   S+   + ++ Y+++F + F +FN
Sbjct: 453 TVIMIRSRASHING-HGARERLRDKKLAVTLLIVTLASLVTLMPFNCYWVIFNLGFSFFN 511

Query: 593 HYL 601
           +Y+
Sbjct: 512 YYV 514


>SB_24408| Best HMM Match : 7tm_1 (HMM E-Value=3.1e-17)
          Length = 439

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 17/63 (26%), Positives = 34/63 (53%)
 Frame = +2

Query: 413 TSAITRSRRHFVNKVRSARARMLME*VCLHRRIVAHISIS*FINWSYYFIVFLIMFHYFN 592
           T  + RSR   +N    AR R+  + + +   IV   S+   + ++ Y+++F + F +FN
Sbjct: 256 TVIMIRSRASHING-HGARERLRDKKLAVTLLIVTLASLVTLMPFNCYWVIFNLGFSFFN 314

Query: 593 HYL 601
           +Y+
Sbjct: 315 YYV 317


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,248,860
Number of Sequences: 59808
Number of extensions: 391393
Number of successful extensions: 612
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 612
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2323539746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)