Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0475
         (827 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   2.6  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   2.6  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   2.6  
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    23   3.4  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = -3

Query: 243 LFLFTILGNSVIRKIVYQFENMRVV 169
           L L T+LGN+++   V+ +  +R+V
Sbjct: 46  LVLATVLGNALVILSVFTYRPLRIV 70


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = -3

Query: 243 LFLFTILGNSVIRKIVYQFENMRVV 169
           L L T+LGN+++   V+ +  +R+V
Sbjct: 46  LVLATVLGNALVILSVFTYRPLRIV 70


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = -3

Query: 243 LFLFTILGNSVIRKIVYQFENMRVV 169
           L L T+LGN+++   V+ +  +R+V
Sbjct: 46  LVLATVLGNALVILSVFTYRPLRIV 70


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = -3

Query: 378 CSLIATRPALRTTPSGTFTFILCLNQNIIQQPPKLV 271
           C        LRT  +G F F + + Q  I  PP+ V
Sbjct: 67  CYTTCIMKLLRTFKNGNFDFDMIVKQLEITMPPEEV 102


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,736
Number of Sequences: 438
Number of extensions: 4464
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26460186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)