Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0473
         (790 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0453 - 34031862-34032668                                         30   2.4  
11_04_0364 - 16791774-16792490,16792545-16793561,16793856-167939...    29   5.6  
11_04_0457 + 17916177-17916526,17917397-17917523,17917887-179182...    28   7.4  

>03_06_0453 - 34031862-34032668
          Length = 268

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +3

Query: 507 PTIIDEAEVRWVIERPPIFLNSLHCKSDKEIEGGELRWVK 626
           P +  +  VR  ++ PP+ L+SL       I GGELRWV+
Sbjct: 71  PVLTVQESVRATLDSPPL-LSSLLPHRANLIGGGELRWVQ 109


>11_04_0364 -
           16791774-16792490,16792545-16793561,16793856-16793920,
           16794787-16796964,16797065-16797322,16799815-16800172
          Length = 1530

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 17/60 (28%), Positives = 29/60 (48%)
 Frame = +3

Query: 591 KEIEGGELRWVKMTNNSSLPMDAIVGGYENEPLYIARAIHFNSLTPGKYLRTTNKMFVPW 770
           K++   EL  ++   N  LP  ++   Y+N P+Y+ R     SL P  Y+   N++   W
Sbjct: 361 KDVIESELWDLEQPRNEVLP--SLELSYKNMPIYLKRCFVAISLYPKDYIFDRNQVLQLW 418


>11_04_0457 +
           17916177-17916526,17917397-17917523,17917887-17918287,
           17918496-17918704,17919328-17919449,17920437-17920562,
           17920675-17920801,17920945-17921000
          Length = 505

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 15/59 (25%), Positives = 28/59 (47%)
 Frame = +3

Query: 129 EIMGDIVELNSTEGQVLYRANSSAIRIRVSFPLSAEPHITFYSKFPPHQELYQLYIGEV 305
           +I+  +  +N    Q    ++ SAI     FPL    H   Y K P  +  Y++++G++
Sbjct: 294 DIVSSVHYVNERYPQAGTSSSGSAIPPLTMFPLELASHKILYEKIPTGE--YKIFLGDI 350


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,041,285
Number of Sequences: 37544
Number of extensions: 439101
Number of successful extensions: 899
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 899
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)