Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0473
         (790 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.         38   3e-04
AJ821850-1|CAH25390.1|  426|Anopheles gambiae alpha-2,6-sialyltr...    25   2.0  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    24   4.7  

>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score = 38.3 bits (85), Expect = 3e-04
 Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
 Frame = +3

Query: 645 LPMDAIVGGY--ENEPLYIARAIHFNSLTPGKYLRTTNKMFVPWG 773
           +P+ A+VGG+  + E LY+ RA H  S T GK   + N +++P+G
Sbjct: 85  VPLGAVVGGHTSDGEILYVGRAYHEGSQTIGKVQCSHNCIYIPYG 129


>AJ821850-1|CAH25390.1|  426|Anopheles gambiae
           alpha-2,6-sialyltransferase protein.
          Length = 426

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -2

Query: 192 SWLCKEPGLQWNSILQYLP*FPV 124
           SW  KEP   WN I  YLP  P+
Sbjct: 174 SW--KEPPFTWNEIGSYLPTSPL 194


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +3

Query: 585 SDKEIEGGELRWVKMTNNSSLPMDAIVGGYEN 680
           SD  +E  + +W ++ +      D ++GGY N
Sbjct: 95  SDLTVEEYKRKWTEIVSMLPRNRDTVIGGYVN 126


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 869,450
Number of Sequences: 2352
Number of extensions: 19173
Number of successful extensions: 79
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 79
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82744797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)