Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0472
         (834 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_02_0031 - 5832475-5832696,5832789-5833064,5833303-5833380,583...    87   2e-17
02_02_0121 + 7005356-7005418,7007533-7007632,7007713-7007810,700...    83   2e-16
01_01_0653 - 4981517-4981738,4981841-4981976,4982066-4982121,498...    82   5e-16
06_03_0479 - 21289903-21290124,21290207-21290342,21290435-212904...    79   6e-15
02_02_0464 - 10552347-10552466,10552683-10552928,10553866-105541...    31   0.86 
01_01_0103 - 773727-774737,774797-774813,774852-775078,777465-77...    30   2.6  
02_05_0135 - 26165263-26165284,26165400-26165458,26165506-261657...    29   3.5  

>05_02_0031 -
           5832475-5832696,5832789-5833064,5833303-5833380,
           5833464-5833550,5833639-5833699,5833792-5833880,
           5834001-5834098,5834197-5834296,5834876-5834953
          Length = 362

 Score = 87.0 bits (206), Expect = 2e-17
 Identities = 46/116 (39%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
 Frame = +1

Query: 451 EERVRTSRGDILVAVRGDRSKRAIITYHDLGLXXXXXXXXXXXXVDMRSIL-EQFCIYHV 627
           E +VRT  G + VA+ GD  K A+ITY D+ L             ++ S+L   FCIYH+
Sbjct: 27  EHQVRTRCGSLSVAIYGDEDKPALITYPDIALNHMSCFQGLLFCPEVASLLLHNFCIYHI 86

Query: 628 NAPGQEEGSPTLPEDYTYPSMDALASQIDFVLGHFGIRSFIGFGVGAGANILSRYA 795
           N  G E G+  +P D   PS++ LA Q+  VL  FG+ S +  GV AGA +L+ +A
Sbjct: 87  NPQGHELGAAPIPSDVPVPSVEDLADQVADVLDFFGLGSVMCLGVTAGAYVLTLFA 142


>02_02_0121 +
           7005356-7005418,7007533-7007632,7007713-7007810,
           7007933-7008021,7008111-7008171,7008253-7008339,
           7008409-7008486,7008583-7008639,7008731-7008786,
           7008877-7009012,7009103-7009324
          Length = 348

 Score = 83.4 bits (197), Expect = 2e-16
 Identities = 44/116 (37%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
 Frame = +1

Query: 451 EERVRTSRGDILVAVRGDRSKRAIITYHDLGLXXXXXXXXXXXXVDMRSIL-EQFCIYHV 627
           E  + T+ G + VAV GD  K A++TY D+ L             +  S+L   FCIYH+
Sbjct: 22  EHHIHTNHGPVSVAVYGDHDKPALVTYPDIALNHMSCFQGLLFCPEAASLLLHNFCIYHI 81

Query: 628 NAPGQEEGSPTLPEDYTYPSMDALASQIDFVLGHFGIRSFIGFGVGAGANILSRYA 795
           + PG E G+  +  +   PS+D LA Q+  VL  FG+ S +  GV AGA IL+ +A
Sbjct: 82  SPPGHELGAAPISPNAPIPSVDDLADQVADVLDFFGLGSVMCLGVSAGAYILTLFA 137


>01_01_0653 -
           4981517-4981738,4981841-4981976,4982066-4982121,
           4982228-4982284,4982373-4982450,4982533-4982619,
           4982707-4982767,4982862-4982950,4983048-4983145,
           4983242-4983341,4983983-4984042
          Length = 347

 Score = 82.2 bits (194), Expect = 5e-16
 Identities = 46/116 (39%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
 Frame = +1

Query: 451 EERVRTSRGDILVAVRGDRSKRAIITYHDLGLXXXXXXXXXXXXVDMRSIL-EQFCIYHV 627
           E RVRT  G + V+V GD  K A+ITY D+ L             +  S+L   FCIYH+
Sbjct: 21  EHRVRTRYGSVSVSVFGDEDKPALITYPDVALNYMSCFQGLFFCPEAASLLLHNFCIYHI 80

Query: 628 NAPGQEEGSPTLPEDYTYPSMDALASQIDFVLGHFGIRSFIGFGVGAGANILSRYA 795
              G E G+  +  D   PS+D L  Q+  VL  FG+ S +  GV AGA IL+ +A
Sbjct: 81  TPQGHELGAAPISSDVPVPSVDELVDQVADVLDFFGLGSVMCLGVTAGAYILTLFA 136


>06_03_0479 -
           21289903-21290124,21290207-21290342,21290435-21290490,
           21290734-21290811,21290902-21290988,21291067-21291127,
           21291220-21291308,21291448-21291545,21291655-21291754,
           21293968-21294030
          Length = 329

 Score = 78.6 bits (185), Expect = 6e-15
 Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
 Frame = +1

Query: 451 EERVRTSRGDILVAVRGDRSKRAIITYHDLGLXXXXXXXXXXXXVDMRSIL-EQFCIYHV 627
           E  ++T+ G + VAV GD  K A++TY D+ L             +  S+L   FCIYH+
Sbjct: 22  EHHIQTNHGSVSVAVYGDHDKPALVTYPDIALNHMSCFQGLLFCPEASSLLLHNFCIYHI 81

Query: 628 NAPGQEEGSPTLPEDYTYPSMDALASQIDFVLGHFGIRSFIGFGVGAGANILSRYA 795
           + PG E G+  +       S+D LA Q+  VL  FG+   +  GV AGA IL+ +A
Sbjct: 82  SPPGHELGAAPVSPSSPVASVDELADQVSDVLDFFGLGPVMCLGVTAGAYILTLFA 137


>02_02_0464 -
           10552347-10552466,10552683-10552928,10553866-10554135,
           10554231-10554413,10554493-10554688,10554775-10555079,
           10555515-10555604,10555689-10555806,10555991-10556088,
           10556187-10556272,10557622-10557736
          Length = 608

 Score = 31.5 bits (68), Expect = 0.86
 Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
 Frame = -1

Query: 759 SETDERSYTKMTQDEVDLRRQSVHARIGVILG*S-RRSLFLARSVYVVDAKLFQN*SHID 583
           S+ DER    +  D ++L  Q +   +  + G   +R    AR++   D  +F   S   
Sbjct: 193 SKKDERHMKNLLCDTLELN-QVLDRDVSALSGGELQRFAIAARAMEEADVYMFDEPSCYL 251

Query: 582 EVKERLKVGGIIESKVMISNY 520
           +VK+RLK   +I S +   NY
Sbjct: 252 DVKQRLKAAQVIRSLLQPKNY 272


>01_01_0103 -
           773727-774737,774797-774813,774852-775078,777465-778237
          Length = 675

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
 Frame = +1

Query: 226 RFVCVRT*GKVNNKYSRSQISYEAN*INK*KMPTSVHENVALLNMMSSDNYEDDLKSV-- 399
           + VCVRT G+ +  YS+ Q  Y  +      +P  VH  + +L+  S+ N ED +  V  
Sbjct: 338 KLVCVRTVGRDDFSYSQGQGGY-GSVYKGVFLPGDVHVAIKMLDGNSNCNGEDFISEVAT 396

Query: 400 --QLHFPSERRLQSDGACVEERVR 465
             ++H  +  RL   G C EE  R
Sbjct: 397 IGRIHHINVVRLV--GFCSEEMRR 418


>02_05_0135 -
           26165263-26165284,26165400-26165458,26165506-26165721,
           26166309-26166362,26167029-26167123,26167220-26167317,
           26167413-26167555,26167900-26168031,26168695-26168823,
           26169370-26169831
          Length = 469

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +1

Query: 649 GSP-TLPEDYTYPSMDALASQIDFVLGHFGIRSFIGFGVGAGANILSRY 792
           GSP T  + Y+      L   +D VLG F   +    G   GANIL RY
Sbjct: 190 GSPVTTAKFYSASFTGDLRQVVDHVLGRFPQSNVYAVGWSLGANILVRY 238


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,901,391
Number of Sequences: 37544
Number of extensions: 457441
Number of successful extensions: 1315
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1311
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2303447664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)