Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0472
(834 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22347| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 8e-19
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 4e-04
SB_23511| Best HMM Match : Abhydrolase_1 (HMM E-Value=2.7e-12) 39 0.006
SB_21129| Best HMM Match : Pkinase (HMM E-Value=2.5e-07) 29 3.5
SB_31955| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_14341| Best HMM Match : DUF1339 (HMM E-Value=4.4) 29 4.6
SB_19489| Best HMM Match : TP2 (HMM E-Value=0.58) 28 8.1
SB_159| Best HMM Match : TP2 (HMM E-Value=0.58) 28 8.1
SB_47946| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_4711| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_2144| Best HMM Match : MACPF (HMM E-Value=0.007) 28 8.1
>SB_22347| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 327
Score = 91.5 bits (217), Expect = 8e-19
Identities = 48/130 (36%), Positives = 71/130 (54%), Gaps = 5/130 (3%)
Frame = +1
Query: 388 LKSVQLHFPSERRLQSDGA--CV--EERVRTSRGDILVAVRGDRSKRAIITYHDLGLXXX 555
L +++H + L A C+ E+ V T GD+ V+++G K AI+T+HD+G
Sbjct: 14 LSFIEVHESDRKVLHDQNAFLCLFAEKNVETKYGDVRVSMQGTEGKPAIVTFHDIGQNHT 73
Query: 556 XXXXXXXXXVDMRSILEQFCIYHVNAPGQEEGSPTLPEDYTYPSMDALAS-QIDFVLGHF 732
VD++ +LE FCIYH++APGQE LPE + YP+M+ LA + V+
Sbjct: 74 SAFLGFFNFVDVQPLLEHFCIYHIDAPGQENCEKQLPETFVYPTMEELADFVVHEVVKQL 133
Query: 733 GIRSFIGFGV 762
I FIG GV
Sbjct: 134 SISRFIGLGV 143
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 42.7 bits (96), Expect = 4e-04
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = +1
Query: 505 RSKRAIITYHDLGLXXXXXXXXXXXXVDMRSILEQFCIYHVNAPGQ 642
+ K +IT+HDLG+ D++SI ++F IYH++APGQ
Sbjct: 811 KKKDVMITFHDLGMNHKTCFEKFLMHEDIKSIKDRFVIYHLDAPGQ 856
>SB_23511| Best HMM Match : Abhydrolase_1 (HMM E-Value=2.7e-12)
Length = 518
Score = 38.7 bits (86), Expect = 0.006
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +1
Query: 658 TLPEDYTYPSMDALASQIDFVLGHFGIRSFIGFGVGAGANILSRYAIINPQK 813
T P +TY S LA + VL ++ + IG G GAN+L +Y P++
Sbjct: 244 TSPRIFTYGSTGELAEMVGQVLANYNCHNLIGVGFSMGANVLLKYLGEEPER 295
>SB_21129| Best HMM Match : Pkinase (HMM E-Value=2.5e-07)
Length = 786
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -1
Query: 480 VAAGSPHPLLHACAVTLQTSFGWKMQLNTFEI 385
V SP P H C + GW QL T E+
Sbjct: 693 VEGSSPIPSAHVCKMAFVDGVGWSSQLTTGEV 724
>SB_31955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 355
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -1
Query: 174 FVTDLAVVVFIILLSVVTIYLRNDVISFCFYHCFT 70
+ T+ A ++ ILL +V I + + FC+Y FT
Sbjct: 175 YYTNTAAYIYTILLKIVYITVPTLISLFCYYKIFT 209
>SB_14341| Best HMM Match : DUF1339 (HMM E-Value=4.4)
Length = 801
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/31 (51%), Positives = 16/31 (51%)
Frame = +3
Query: 633 SWPRRGISDSTRGLHLS*HGRSGVSDRLRLG 725
S PRRG S RGL L HG G R LG
Sbjct: 178 SGPRRGWSRGARGLGLQGHGEGGREAREGLG 208
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 639 PRRGISDSTRGLHLS*HGRSGVSDR 713
PRRG S RGL L HGR+ + R
Sbjct: 287 PRRGWSQGARGLGLLGHGRADIEPR 311
>SB_19489| Best HMM Match : TP2 (HMM E-Value=0.58)
Length = 429
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 512 LLRSPRTATRMSPREVRTLSSTHAPSLCK 426
+ +SP TA+R PR+ L H PS+ +
Sbjct: 204 MAKSPETASRREPRQRLKLPPLHVPSIAR 232
>SB_159| Best HMM Match : TP2 (HMM E-Value=0.58)
Length = 429
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 512 LLRSPRTATRMSPREVRTLSSTHAPSLCK 426
+ +SP TA+R PR+ L H PS+ +
Sbjct: 204 MAKSPETASRREPRQRLKLPPLHVPSIAR 232
>SB_47946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 460
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 448 VEERVRTSRGDILVAVRGDRSKRAIITYHDLGL 546
V+ ++ S GD+ + RGD K A+ T +D+ L
Sbjct: 314 VKTKIINSPGDLSITHRGDLQKIALTTLYDISL 346
>SB_4711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 78
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -1
Query: 183 SLVFVTDLAVVVFIILLSVVTIYLRNDVISFCFYHCFTRFIVNVL 49
S+ + + V I + VTI + N++ + F H F I+N L
Sbjct: 14 SITITINNTITVTITITITVTITINNNLQQYHFQHLFNTTIINTL 58
>SB_2144| Best HMM Match : MACPF (HMM E-Value=0.007)
Length = 434
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/41 (26%), Positives = 27/41 (65%)
Frame = -1
Query: 186 NSLVFVTDLAVVVFIILLSVVTIYLRNDVISFCFYHCFTRF 64
N +V T + +++F ++++V+ IYL+ +F ++ F+R+
Sbjct: 200 NVIVIFTIIIIIIFTVIVNVIAIYLQ----AFNYFLLFSRY 236
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,591,509
Number of Sequences: 59808
Number of extensions: 538578
Number of successful extensions: 1493
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1493
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2347493764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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