Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0467
         (741 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    23   2.6  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   3.4  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   4.5  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   6.0  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   6.0  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   6.0  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   7.9  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   7.9  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   7.9  

>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +3

Query: 411 PQPYLSPLY-VGYPSSATHQIASAGS 485
           P PYLSPL+    P +A+ +  S+ S
Sbjct: 110 PHPYLSPLFHSAAPRTASRETKSSES 135


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -2

Query: 374 PLETVLTSARAPGETTNRSGC 312
           P    LTS   PGET N   C
Sbjct: 495 PHSCKLTSKEVPGETINLQTC 515


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -1

Query: 726 LIPTA*TNMTPSFDTVMVREPSAPRQASSDIS 631
           L P +  N T ++ +    +PS+ +Q SSD++
Sbjct: 60  LFPFSPCNNTANYKSEAQNQPSSYKQPSSDMA 91


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = -3

Query: 709 NEYDSQFRHGYGQGAKCPSPGIFRYFFDVHRHRNEA 602
           N+Y  +   GY  GA          +  +HR++ EA
Sbjct: 134 NKYQLEVDSGYHLGASSTPTNSCMEYQHLHRYKEEA 169


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = -3

Query: 709 NEYDSQFRHGYGQGAKCPSPGIFRYFFDVHRHRNEA 602
           N+Y  +   GY  GA          +  +HR++ EA
Sbjct: 134 NKYQLEVDSGYHLGASSTPTNSCMEYQHLHRYKEEA 169


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = -3

Query: 709 NEYDSQFRHGYGQGAKCPSPGIFRYFFDVHRHRNEA 602
           N+Y  +   GY  GA          +  +HR++ EA
Sbjct: 134 NKYQLEVDSGYHLGASSTPTNSCMEYQHLHRYKEEA 169


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = -2

Query: 140 NYVDTFRNHELTSKCRNYDVC 78
           N V    NH+ T     YD C
Sbjct: 72  NSVTPMVNHDFTQHLSQYDTC 92


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = -2

Query: 140 NYVDTFRNHELTSKCRNYDVC 78
           N V    NH+ T     YD C
Sbjct: 72  NSVTPMVNHDFTQHLSQYDTC 92


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = -2

Query: 140 NYVDTFRNHELTSKCRNYDVC 78
           N V    NH+ T     YD C
Sbjct: 72  NSVTPMVNHDFTQHLSQYDTC 92


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,000
Number of Sequences: 336
Number of extensions: 4111
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)