Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0467
         (741 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    24   1.7  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    23   4.0  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    22   5.3  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   9.2  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   9.2  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   9.2  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   9.2  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -3

Query: 658 PSPGIFRYFFDVHRHRNEAAA*CYTGYDPGCYQ 560
           P+P + RYF  +  +  E A       DP  Y+
Sbjct: 828 PTPNLLRYFASIATNPKEQAQLNLLASDPAVYE 860


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -2

Query: 698 LPVSTRLWSGSQVPLARHLPIFL 630
           LP ST  +SGS   L +HLP  L
Sbjct: 367 LPTST--YSGSPTELPKHLPTSL 387


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +2

Query: 668 SLTITVSKLGVIFVYAVGMS 727
           SL   VSK GV+FV  VG S
Sbjct: 304 SLAKAVSKNGVLFVGLVGNS 323


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 398 VSWVATALPLAAICGIPFFSYA 463
           +S V   + LAAICG    SYA
Sbjct: 2   LSKVVLLVALAAICGAQGASYA 23


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 398 VSWVATALPLAAICGIPFFSYA 463
           +S V   + LAAICG    SYA
Sbjct: 2   LSKVVLLVALAAICGAQGASYA 23


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = +1

Query: 298 NVHVWHPDRLV 330
           N ++WHP ++V
Sbjct: 144 NYYIWHPGKIV 154


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = +1

Query: 298 NVHVWHPDRLV 330
           N ++WHP ++V
Sbjct: 144 NYYIWHPGKIV 154


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,212
Number of Sequences: 438
Number of extensions: 5291
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)