Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0466
         (722 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9AQY4 Cluster: Putative uncharacterized protein; n=1; ...    35   1.8  
UniRef50_Q9YW77 Cluster: ORF MSV015 leucine rich repeat gene fam...    33   7.1  
UniRef50_A7BRQ8 Cluster: Secreted protein; n=1; Beggiatoa sp. PS...    33   9.4  
UniRef50_Q54JI8 Cluster: Putative uncharacterized protein; n=1; ...    33   9.4  

>UniRef50_Q9AQY4 Cluster: Putative uncharacterized protein; n=1;
           Guillardia theta|Rep: Putative uncharacterized protein -
           Guillardia theta (Cryptomonas phi)
          Length = 151

 Score = 35.1 bits (77), Expect = 1.8
 Identities = 17/37 (45%), Positives = 25/37 (67%)
 Frame = -3

Query: 390 SSLVALFIFKETFFKQSLLRFEGYTFKKFPPVGSIIL 280
           SSLV LF F   F ++ L+ F+ + ++ FPP+GSI L
Sbjct: 28  SSLVFLFFFFLAFHEEVLVCFDVFIWRLFPPLGSISL 64


>UniRef50_Q9YW77 Cluster: ORF MSV015 leucine rich repeat gene family
           protein, similar to Amsacta moorei entomopoxvirus Q3 ORF
           SW:P28854; n=2; Melanoplus sanguinipes
           entomopoxvirus|Rep: ORF MSV015 leucine rich repeat gene
           family protein, similar to Amsacta moorei entomopoxvirus
           Q3 ORF SW:P28854 - Melanoplus sanguinipes entomopoxvirus
           (MsEPV)
          Length = 386

 Score = 33.1 bits (72), Expect = 7.1
 Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
 Frame = +2

Query: 209 KY-NSPTEIKSELTKTCKTIFDFSERIILPTGGNFLKVY-PSNLSKLCLKNVSLK 367
           KY N+  +   EL++ C+T  +F+E + +P     LK Y P ++++L +KN ++K
Sbjct: 12  KYLNNDLDKIHELSEQCETFREFNELLNIPLYDKHLKYYNPEDVTRLHIKNNNIK 66


>UniRef50_A7BRQ8 Cluster: Secreted protein; n=1; Beggiatoa sp.
           PS|Rep: Secreted protein - Beggiatoa sp. PS
          Length = 1046

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
 Frame = +1

Query: 547 ILSKIKNRGFLKNLVMYTNVHTIKELPRKGCK---TSLN---IISEIENW 678
           +  K+KNRGF+++ + Y N  T +++ R G     TS N   I S IE W
Sbjct: 329 VYQKLKNRGFVRDNIRYFNYKTKQDIDRDGANDIFTSPNKSDIQSTIETW 378


>UniRef50_Q54JI8 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 451

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
 Frame = +1

Query: 514 KSSSIL---KIF*NILSKIKNRGFLKNLVMYTNVHTIKELPRKGCKTSLNIISEIENWVL 684
           K+ SIL   KI    +S+  N  F K +  +  + T+KELP       +  I+ I NW  
Sbjct: 321 KNKSILELAKINRKDVSEFTNDNFFKTITWHNKMQTLKELPLNYLGKQVPTITNISNWTS 380

Query: 685 LKTDKFN 705
              +K +
Sbjct: 381 FDYNKIS 387


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 609,977,924
Number of Sequences: 1657284
Number of extensions: 11559196
Number of successful extensions: 28309
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28294
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58677691418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)