Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0466
         (722 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.47 
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   3.3  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   5.8  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    21   7.6  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    21   7.6  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    21   7.6  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    21   7.6  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    21   7.6  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   7.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -2

Query: 643 FYNLF*VILLLYEHLYT*LDFLKSLYFLFYLVYF 542
           FY  F ++L +Y   Y  + F   L FL  + YF
Sbjct: 103 FYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYF 136



 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/45 (24%), Positives = 23/45 (51%)
 Frame = -2

Query: 646 LFYNLF*VILLLYEHLYT*LDFLKSLYFLFYLVYFRIFLK*NYFC 512
           +F+N+  + LL  ++    L FL  +Y+ FY  +    +   ++C
Sbjct: 187 IFFNMHLLFLLCLDYFTLHLLFLPCIYY-FYSAFIIFTIHLLFYC 230



 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -2

Query: 646 LFYNLF*VILLLYEHLYT*LDFLKSLYFLFYLVYF 542
           LFY +  ++L +Y   Y  + F   L  L  + YF
Sbjct: 227 LFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYF 261


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +1

Query: 622 LPRKGCKTSLNIISEIENWVLLK 690
           L +K  K  + ++ EIE+WVLLK
Sbjct: 388 LRQKNQKGEVTVL-EIEDWVLLK 409


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = +1

Query: 595 YTNVHTIKELPRKGCKTSLNIIS 663
           YTN   ++E+ RKG + +++ I+
Sbjct: 237 YTNYSAVQEMHRKGHEIAVHSIT 259


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +3

Query: 426 ADIHTAPQW 452
           ADIH  PQW
Sbjct: 303 ADIHEMPQW 311


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +3

Query: 426 ADIHTAPQW 452
           ADIH  PQW
Sbjct: 303 ADIHEMPQW 311


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +3

Query: 426 ADIHTAPQW 452
           ADIH  PQW
Sbjct: 303 ADIHEMPQW 311


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +3

Query: 426 ADIHTAPQW 452
           ADIH  PQW
Sbjct: 303 ADIHEMPQW 311


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +3

Query: 426 ADIHTAPQW 452
           ADIH  PQW
Sbjct: 303 ADIHEMPQW 311


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 631 KGCKTSLNIISEIENWV 681
           K  K S+NIIS ++ W+
Sbjct: 191 KTLKLSINIISLVQLWI 207


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,121
Number of Sequences: 336
Number of extensions: 3416
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)