Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0466
         (722 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82282-9|CAB05281.2|  361|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z68316-2|CAA92681.1|  352|Caenorhabditis elegans Hypothetical pr...    28   7.8  
AL110482-7|CAB54388.1|  106|Caenorhabditis elegans Hypothetical ...    28   7.8  

>Z82282-9|CAB05281.2|  361|Caenorhabditis elegans Hypothetical
           protein T07G12.12 protein.
          Length = 361

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
 Frame = +1

Query: 454 KCSHCSWTCHGQSHATVHY--YKSSSILKIF*NILSKIKNRGFLK 582
           KC  C  TCH       HY  + S+S ++ F       KN+GF K
Sbjct: 277 KCKKCKHTCHTIRQMRYHYRIFHSTSKMEGFGVSGLPTKNKGFQK 321


>Z68316-2|CAA92681.1|  352|Caenorhabditis elegans Hypothetical
           protein K08E4.3 protein.
          Length = 352

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +1

Query: 409 FYCPCRLIYIRPHNGKCSHCSWTCHG 486
           F CP    YIR +NG+CS  SW   G
Sbjct: 212 FPCPSDYDYIRANNGRCS--SWWLSG 235


>AL110482-7|CAB54388.1|  106|Caenorhabditis elegans Hypothetical
           protein Y39G8B.9 protein.
          Length = 106

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 448 NGKCSHCSWTCHGQSH 495
           NG C++C WTC  + H
Sbjct: 50  NGFCTNCQWTCAQRKH 65


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,578,672
Number of Sequences: 27780
Number of extensions: 291855
Number of successful extensions: 630
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 630
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)