Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0466
         (722 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g44510.1 68418.m05453 disease resistance protein (TIR-NBS-LRR...    28   5.5  
At4g17140.1 68417.m02580 pleckstrin homology (PH) domain-contain...    28   7.2  
At4g29490.1 68417.m04208 Xaa-Pro dipeptidase, putative / prolida...    27   9.5  

>At5g44510.1 68418.m05453 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1187

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +1

Query: 595 YTNVHTIKELPRKGCKTSLNIISEIENWVLLK 690
           + NV ++KEL   GC + L I S I N V LK
Sbjct: 748 FGNVTSLKELNLSGCSSLLEIPSSIGNIVNLK 779


>At4g17140.1 68417.m02580 pleckstrin homology (PH) domain-containing
           protein contains Pfam profile PF00169: PH domain
          Length = 1322

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
 Frame = -1

Query: 491 LCPWHVHEQWEHL-PL-WGRM--YISLQGQ*KNCISRDH 387
           + PWH+ + WE L P  W ++  Y +  G+  +C++R H
Sbjct: 135 MSPWHIDKPWEVLTPFEWDQIFRYGTKDGKPADCLTRKH 173


>At4g29490.1 68417.m04208 Xaa-Pro dipeptidase, putative / prolidase,
           putative / imidodipeptidase, putative similar to
           SP|P12955 Xaa-Pro dipeptidase (EC 3.4.13.9) (X-Pro
           dipeptidase) (Proline dipeptidase) (Prolidase)
           (Imidodipeptidase) {Homo sapiens}; contains Pfam
           profiles PF00557: metallopeptidase family M24, PF05195:
           Aminopeptidase P, N-terminal domain
          Length = 333

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
 Frame = +1

Query: 451 GKCSHCSWTC---HGQSHATVHY 510
           G C HCS+TC    G + A +HY
Sbjct: 232 GGCRHCSYTCICATGDNSAVLHY 254


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,406,400
Number of Sequences: 28952
Number of extensions: 255889
Number of successful extensions: 593
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1575119672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)