Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0465
         (791 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_15097| Best HMM Match : p450 (HMM E-Value=0)                        29   3.3  
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   7.5  
SB_2192| Best HMM Match : rve (HMM E-Value=4e-23)                      28   7.5  

>SB_15097| Best HMM Match : p450 (HMM E-Value=0)
          Length = 1310

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = -1

Query: 560  CNTANSYGIKFEYNSTNNYIYVF*KHRN-VFVNGSTCSRENMAL 432
            C T  +  +   + ST   ++ F +HRN +F+N ST +  + AL
Sbjct: 974  CTTRTTLYVLIAFRSTLELVFYFSRHRNRMFMNNSTGALRSQAL 1017


>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3297

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -2

Query: 424 GNSIKLNNAVTSRPIKMLKGRKYILN 347
           GN  +++N +T   I+ LKG+K+ LN
Sbjct: 780 GNERRISNQMTKTQIEALKGKKWTLN 805


>SB_2192| Best HMM Match : rve (HMM E-Value=4e-23)
          Length = 491

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -2

Query: 424 GNSIKLNNAVTSRPIKMLKGRKYILN 347
           GN  +++N +T   I+ LKG+K+ LN
Sbjct: 50  GNERRISNQMTKTQIEALKGKKWTLN 75


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,474,294
Number of Sequences: 59808
Number of extensions: 364755
Number of successful extensions: 620
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2179815638
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)