Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0465
         (791 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g40590.1 68418.m04926 DC1 domain-containing protein predicted...    29   3.5  
At3g02110.1 68416.m00177 serine carboxypeptidase S10 family prot...    28   6.2  

>At5g40590.1 68418.m04926 DC1 domain-containing protein predicted
           protein, Arabidopsis thaliana
          Length = 234

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -1

Query: 614 THQLHYKIKIIKSNRSFSCNTANSYGIKFEYN 519
           +HQ H    I     +++CN    YG  F YN
Sbjct: 68  SHQPHTLTLIYSPKSTYTCNACGEYGSSFTYN 99


>At3g02110.1 68416.m00177 serine carboxypeptidase S10 family protein
           similar to serine carboxypeptidase II (CP-MII)
           GB:CAA70815 (SP:P08818) [Hordeum vulgare]
          Length = 473

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = -1

Query: 641 SHSVILFKNTHQLHYKIKIIKSNRSFSCNTANSYGIKFEYNSTNNY 504
           SH++I  +  HQL       +   S  C T  SY ++ E+ + + Y
Sbjct: 236 SHAMISDRTYHQLISTCDFSRQKESDECETLYSYAMEQEFGNIDQY 281


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,289,705
Number of Sequences: 28952
Number of extensions: 261384
Number of successful extensions: 444
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 444
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1785055200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)