Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0463
         (762 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_42955| Best HMM Match : Oxidored_q1_N (HMM E-Value=4.4)             34   0.14 
SB_30371| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.4  

>SB_42955| Best HMM Match : Oxidored_q1_N (HMM E-Value=4.4)
          Length = 435

 Score = 33.9 bits (74), Expect = 0.14
 Identities = 18/38 (47%), Positives = 23/38 (60%)
 Frame = +1

Query: 448 MITILLRLYFISYHLI*FHP*MSQINHLHFISLHNITF 561
           +IT L+RLY ISY  I F P  + + HL+ IS   I F
Sbjct: 190 LITYLIRLYPISYRTIHFSPLFTYLIHLYPISYRTIHF 227



 Score = 32.7 bits (71), Expect = 0.33
 Identities = 18/38 (47%), Positives = 23/38 (60%)
 Frame = +1

Query: 448 MITILLRLYFISYHLI*FHP*MSQINHLHFISLHNITF 561
           +IT L+RLY ISY  I F P ++   HL+ IS   I F
Sbjct: 30  LITYLIRLYPISYRTIHFSPLLTYPVHLYPISYRTIHF 67



 Score = 30.3 bits (65), Expect = 1.8
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +1

Query: 448 MITILLRLYFISYHLI*FHP*MSQINHLHFISLHNITF 561
           + T L+ LY ISY  I F P  + + HL+ IS   I F
Sbjct: 210 LFTYLIHLYPISYRTIHFSPLFTYLIHLYPISYRTIHF 247



 Score = 30.3 bits (65), Expect = 1.8
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +1

Query: 448 MITILLRLYFISYHLI*FHP*MSQINHLHFISLHNITF 561
           + T L+ LY ISY  I F P  + + HL+ IS   I F
Sbjct: 370 LFTYLINLYPISYRTIHFSPLFTYLIHLYPISYRTIHF 407



 Score = 29.5 bits (63), Expect = 3.1
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +1

Query: 448 MITILLRLYFISYHLI*FHP*MSQINHLHFISLHNITF 561
           + T L+RLY ISY  I F P ++ +  L+ IS   I F
Sbjct: 10  LFTYLIRLYPISYRTIHFSPLITYLIRLYPISYRTIHF 47



 Score = 29.5 bits (63), Expect = 3.1
 Identities = 30/97 (30%), Positives = 43/97 (44%)
 Frame = +1

Query: 448 MITILLRLYFISYHLI*FHP*MSQINHLHFISLHNITFHKNMDIH*NKT*LKGLSYQVIK 627
           + T L+ LY ISY  I F P ++ + +L+ IS   I F   +  H +   L  +SY+ I 
Sbjct: 290 LFTYLIHLYPISYRTIHFSPLLTYLINLYPISYRTIHFSPLVTYHIH---LYPISYRTIH 346

Query: 628 SFKKSVRMVYKASYYWKRYLTI*I*QFYTELNVLFNI 738
               S    Y    Y   Y TI     +T L  L+ I
Sbjct: 347 F---SPLFTYLIHLYPISYRTIHFSPLFTYLINLYPI 380



 Score = 29.1 bits (62), Expect = 4.1
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +1

Query: 448 MITILLRLYFISYHLI*FHP*MSQINHLHFISLHNITF 561
           + T L+ LY ISY  I F P ++   HL+ IS   I F
Sbjct: 70  LFTYLIHLYPISYRTIHFSPLLTYPVHLYPISYRTIHF 107



 Score = 28.7 bits (61), Expect = 5.5
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +1

Query: 448 MITILLRLYFISYHLI*FHP*MSQINHLHFISLHNI 555
           + T L+ LY ISY  I F P  + + HL+ IS   I
Sbjct: 390 LFTYLIHLYPISYRTIHFSPLFTYLIHLYPISYRTI 425



 Score = 28.3 bits (60), Expect = 7.2
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +1

Query: 448 MITILLRLYFISYHLI*FHP*MSQINHLHFISLHNITF 561
           + T L+RLY ISY  I F P  + +  L+ IS   I F
Sbjct: 110 LFTYLIRLYPISYRNIHFSPLFTYLIRLYPISYRTIHF 147



 Score = 27.9 bits (59), Expect = 9.5
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +1

Query: 448 MITILLRLYFISYHLI*FHP*MSQINHLHFISLHNITF 561
           ++T  + LY ISY  I F P  + + HL+ IS   I F
Sbjct: 50  LLTYPVHLYPISYRTIHFSPLFTYLIHLYPISYRTIHF 87



 Score = 27.9 bits (59), Expect = 9.5
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +1

Query: 448 MITILLRLYFISYHLI*FHP*MSQINHLHFISLHNITF 561
           + T L+RLY ISY  I F P  + +  L+ IS   I F
Sbjct: 130 LFTYLIRLYPISYRTIHFSPLFTYLICLYPISYRTIHF 167



 Score = 27.9 bits (59), Expect = 9.5
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +1

Query: 448 MITILLRLYFISYHLI*FHP*MSQINHLHFISLHNITF 561
           + T  + LY ISY  I F P  + + HL+ IS   I F
Sbjct: 270 LFTYRINLYPISYRTIHFSPLFTYLIHLYPISYRTIHF 307


>SB_30371| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 955

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 373 WENETKPLDITSQDPPISPLKKS 441
           W++ET P D+    PPI P++ S
Sbjct: 499 WQDETSPSDVAESPPPIPPIRCS 521


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,761,682
Number of Sequences: 59808
Number of extensions: 359369
Number of successful extensions: 608
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2082369341
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)