Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0463
         (762 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132877-14|CAD92388.1|  439|Caenorhabditis elegans Hypothetical...    30   2.1  
AL132877-13|CAC70110.4|  478|Caenorhabditis elegans Hypothetical...    30   2.1  
U40410-1|AAA81391.1|  480|Caenorhabditis elegans Hypothetical pr...    29   2.7  

>AL132877-14|CAD92388.1|  439|Caenorhabditis elegans Hypothetical
           protein Y105E8B.8b protein.
          Length = 439

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +3

Query: 210 RNKEHNKSPYGTFW-WEGGVKLCDLFYFVYLVFLR 311
           RN E     +GT W WEG  +L ++ YF+YL+ LR
Sbjct: 236 RNTEMFAGRFGTKWSWEGPQRLRNV-YFIYLLELR 269


>AL132877-13|CAC70110.4|  478|Caenorhabditis elegans Hypothetical
           protein Y105E8B.8a protein.
          Length = 478

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +3

Query: 210 RNKEHNKSPYGTFW-WEGGVKLCDLFYFVYLVFLR 311
           RN E     +GT W WEG  +L ++ YF+YL+ LR
Sbjct: 275 RNTEMFAGRFGTKWSWEGPQRLRNV-YFIYLLELR 308


>U40410-1|AAA81391.1|  480|Caenorhabditis elegans Hypothetical
           protein C54G7.2 protein.
          Length = 480

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 444 LRFFQWTYWWILRSYVQRLCFIF 376
           L FFQW +WW +  +  R  + F
Sbjct: 256 LPFFQWFFWWFITIFFIRCAYYF 278


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,247,187
Number of Sequences: 27780
Number of extensions: 292680
Number of successful extensions: 564
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 564
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)