Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0462
         (749 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q28RA2 Cluster: ComEC/Rec2-related protein; n=2; Rhodob...    36   0.81 
UniRef50_Q6SEV7 Cluster: Putative uncharacterized protein; n=1; ...    34   3.3  
UniRef50_A7RNC9 Cluster: Predicted protein; n=1; Nematostella ve...    33   9.9  

>UniRef50_Q28RA2 Cluster: ComEC/Rec2-related protein; n=2;
           Rhodobacteraceae|Rep: ComEC/Rec2-related protein -
           Jannaschia sp. (strain CCS1)
          Length = 706

 Score = 36.3 bits (80), Expect = 0.81
 Identities = 18/39 (46%), Positives = 22/39 (56%)
 Frame = +2

Query: 353 PGGLSSFTRTGGRAKAQPGGVGFANSYPSASEGDLTTQE 469
           PGGL   T   GRA ++P G GF       ++GDL TQE
Sbjct: 540 PGGLVGLTTDQGRALSRPRGDGFVAGIWLENDGDLITQE 578


>UniRef50_Q6SEV7 Cluster: Putative uncharacterized protein; n=1;
          uncultured bacterium 582|Rep: Putative uncharacterized
          protein - uncultured bacterium 582
          Length = 41

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +1

Query: 1  FKCIKMYFLFFSWIFYKNVF 60
          F CIK+YF+F  WIFY + F
Sbjct: 4  FSCIKIYFIFDFWIFYSSYF 23


>UniRef50_A7RNC9 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 511

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
 Frame = +2

Query: 26  YFLVGFFIKTYF---VSFLETIIYFLLVRSIWYQY 121
           Y LV + I TY+   VS L  I+++  +R +WYQY
Sbjct: 157 YLLVSYGINTYWYRMVSVLTGIVWYQYLRIVWYQY 191


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 607,789,476
Number of Sequences: 1657284
Number of extensions: 10644231
Number of successful extensions: 27619
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27604
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)