Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0462
         (749 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    31   0.010
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   2.0  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   2.0  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    23   2.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 31.1 bits (67), Expect = 0.010
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
 Frame = +2

Query: 8   VLKCIFYFLVGFFIKTYFVSFLETIIYFLL----VRSIWYQYQ*FDVF 139
           +L C++YF   F I T  + FL  I YF++    +  I+Y Y  F +F
Sbjct: 109 ILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAFIIF 156



 Score = 27.9 bits (59), Expect = 0.092
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +2

Query: 11  LKCIFYFLVGFFIKTYFVSFLETIIYFLLVRSIWYQYQ*FDV 136
           L CI+YF   F I T  + F   +I  L +   +Y +  F V
Sbjct: 209 LPCIYYFYSAFIIFTIHLLFYCVLIILLCIYYFYYAFILFTV 250



 Score = 26.6 bits (56), Expect = 0.21
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 8   VLKCIFYFLVGFFIKTYFVSFLETIIYF 91
           +L CI+YF   F + T  +  L  I YF
Sbjct: 234 ILLCIYYFYYAFILFTVHLLLLVCIYYF 261



 Score = 26.2 bits (55), Expect = 0.28
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +2

Query: 11  LKCIFYFLVGFFIKTYFVSFLETIIYF 91
           L CI+YF   F I T  + FL  I +F
Sbjct: 143 LLCIYYFYCAFIIFTVHLLFLLCIYHF 169



 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 11  LKCIFYFLVGFFIKTYFVSFLETIIYF 91
           L CI++F   F I T  + F    I+F
Sbjct: 163 LLCIYHFFCAFIIFTMHLLFCCAFIFF 189


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -3

Query: 189 TNFFGCLNGVNLIEVQLKTSNY*Y 118
           T     LN   LIE  + TSNY Y
Sbjct: 15  TTTSSALNSTPLIEFNISTSNYLY 38


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -3

Query: 189 TNFFGCLNGVNLIEVQLKTSNY*Y 118
           T     LN   LIE  + TSNY Y
Sbjct: 15  TTTSSALNSTPLIEFNISTSNYLY 38


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -3

Query: 261 SFRRHSCNLTGEQFKICQKNNHNKTNF 181
           S ++++C L    ++ CQ+N HN  +F
Sbjct: 49  SLKQYTCELK-LWWEFCQRNGHNCLDF 74


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,288
Number of Sequences: 336
Number of extensions: 2920
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)