Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0462
         (749 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    25   0.76 
S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.               24   1.3  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   4.0  

>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
          peptide protein.
          Length = 50

 Score = 25.0 bits (52), Expect = 0.76
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +2

Query: 5  NVLKCIFYFLVGFFIKTYFVS 67
          ++L+C F+FL    I +YFV+
Sbjct: 3  SMLRCTFFFLSVILITSYFVT 23


>S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.
          Length = 46

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +2

Query: 5  NVLKCIFYFLVGFFIKTYFVS 67
          ++L+CI+ FL    I +YFV+
Sbjct: 3  SMLRCIYLFLSVILITSYFVT 23


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 228 EQFKICQKNNHNKTNFFGCLNGVN 157
           ++F   Q+NN+N   F+   NG N
Sbjct: 128 QKFIFPQENNYNDNYFYSKSNGSN 151


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,283
Number of Sequences: 438
Number of extensions: 3333
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)