Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0461
         (710 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    25   3.1  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    25   3.1  
AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    23   9.5  

>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +1

Query: 307 DWCPKLYDSRLSFQTYWENCIRTIDTS 387
           DW   +Y+S  +  T    C+R++ T+
Sbjct: 20  DWVEAVYESTSTASTAQSECVRSVTTA 46


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +1

Query: 307 DWCPKLYDSRLSFQTYWENCIRTIDTS 387
           DW   +Y+S  +  T    C+R++ T+
Sbjct: 20  DWVEAVYESTSTASTAQSECVRSVTTA 46


>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -3

Query: 267 YYHRKWKWKKENQ 229
           + +R+ KWKKEN+
Sbjct: 292 FQNRRMKWKKENK 304


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 726,271
Number of Sequences: 2352
Number of extensions: 14954
Number of successful extensions: 29
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)