Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0461
         (710 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110477-12|CAB54335.1|  348|Caenorhabditis elegans Hypothetical...    40   0.001
Z66523-7|CAA91416.2|  409|Caenorhabditis elegans Hypothetical pr...    30   1.9  
U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z83219-2|CAB05695.1|  377|Caenorhabditis elegans Hypothetical pr...    28   5.7  

>AL110477-12|CAB54335.1|  348|Caenorhabditis elegans Hypothetical
           protein Y113G7B.17 protein.
          Length = 348

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 35/147 (23%), Positives = 66/147 (44%), Gaps = 3/147 (2%)
 Frame = -2

Query: 604 WNNVHGVSMSAFAKHLRKNKSTKPEILNI-EQKDLLGDEVALCWINLREDSASDLNEFSI 428
           W++V+G +MSA      KN + K  +++I +   +  +   L  ++L      DL  F  
Sbjct: 193 WDSVYGFNMSAI-----KNVAIKEPLVDIVDNAQVNTNNCLLKDVDLYTVKIEDLT-FKS 246

Query: 427 QHVVGAKKSGSYEGLCLWFECNFPSMSETKDENRIILDTSPNSLATHWKQTAIVLPQEVE 248
              +   +S   +    +F   F     +K   +    T P+   THWKQT   L   + 
Sbjct: 247 DFKLRCTRSDYIQAFVTFFTVEF-----SKCHKKTGFSTGPDVQYTHWKQTVFYLKDALT 301

Query: 247 VEEGEPI--AFQLSMKRDTEHNRRYNL 173
           V++GE I  +F+++  ++ E +   N+
Sbjct: 302 VKKGEEITGSFEMAPNKNNERDLDINI 328


>Z66523-7|CAA91416.2|  409|Caenorhabditis elegans Hypothetical
           protein M05D6.7 protein.
          Length = 409

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -2

Query: 367 CNFPSMSETKDENRIILDTSPNSLATHW 284
           C+  S+S+ K  N++I+D + NSL   W
Sbjct: 71  CDITSLSKIKHSNQVIIDEATNSLQIVW 98


>U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical
           protein C50F2.2 protein.
          Length = 1029

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
 Frame = -2

Query: 301 SLATHWKQTAIVL----PQEVEVEEGEPIAFQLSMKR 203
           SL  HW    IVL    PQE +VEE +P++   S+KR
Sbjct: 621 SLKRHWNDKMIVLNGDVPQE-KVEESKPLSIAESLKR 656


>Z83219-2|CAB05695.1|  377|Caenorhabditis elegans Hypothetical
           protein C31C9.3 protein.
          Length = 377

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = -2

Query: 547 KSTKPEILNIEQKDLLGDEVALCWINLREDSASDLNEFSIQHVVGAKK 404
           ++++P +LNIE + L   E +    NL+      L+ +SIQ + G +K
Sbjct: 215 ENSEPHVLNIEFEGLNFHETSSVLKNLKNVEEIQLSMYSIQELSGIEK 262


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,857,689
Number of Sequences: 27780
Number of extensions: 337628
Number of successful extensions: 983
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)