Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0456
(539 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23514-5|AAC46541.2| 590|Caenorhabditis elegans Phosphatase 2a ... 151 3e-37
Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical pr... 33 0.17
AF003136-1|AAK21379.3| 896|Caenorhabditis elegans Importin beta... 31 0.53
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 30 0.93
Z75549-1|CAA99917.1| 424|Caenorhabditis elegans Hypothetical pr... 30 1.2
AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical ... 30 1.2
AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical ... 29 2.1
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 29 2.8
U97407-9|AAL02457.2| 1768|Caenorhabditis elegans Hypothetical pr... 28 3.7
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 28 3.7
Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical p... 28 4.9
U61945-5|AAB03128.1| 517|Caenorhabditis elegans Hypothetical pr... 28 4.9
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 28 4.9
AF067946-4|AAC17683.1| 345|Caenorhabditis elegans Hypothetical ... 28 4.9
>U23514-5|AAC46541.2| 590|Caenorhabditis elegans Phosphatase 2a
regulatory a subunitprotein 1 protein.
Length = 590
Score = 151 bits (366), Expect = 3e-37
Identities = 79/178 (44%), Positives = 111/178 (62%)
Frame = +1
Query: 1 VKAELRQHFCSLCQDDTPMVRRAAAYKLGEFAKVVEIEYVKSDLIPIFVFLAKDDQDSVR 180
+K+EL+ F +LC+DDTPMVRRAAA KLGEFAKV E V L L D+QDSVR
Sbjct: 164 IKSELKSMFRTLCRDDTPMVRRAAAAKLGEFAKVFEKTAVIEGLHSSLTDLHVDEQDSVR 223
Query: 181 LLAAEACAVVASLLAPEDMEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELART 360
LL E+ +LL + ++ + P + D SWRVRYMVA+K +E+Q +G ++ T
Sbjct: 224 LLTVESAIAFGTLLDKANKKKLIEPILIELFDDKSWRVRYMVAEKLIEIQNVLGEDMDTT 283
Query: 361 DLAQIFQALLKDSEAEVRAAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQ 534
L ++ LLKD E EVR AA ++++F +NL + +++II +L K+LV D NQ
Sbjct: 284 HLVNMYTNLLKDPEGEVRCAATQRLQEFALNLPEDKRQNIICNSLLNVAKELVTDGNQ 341
Score = 62.5 bits (145), Expect = 2e-10
Identities = 50/174 (28%), Positives = 79/174 (45%), Gaps = 1/174 (0%)
Frame = +1
Query: 7 AELRQHFCSLCQDDTPMVRRAAAYKLGEFAKVVEIEYVKSDLIPIFVFLAKDDQDSVRLL 186
+EL + L D TP VR L + +V+ + + L+P V LA+D + VRL
Sbjct: 365 SELLPIYMQLLNDQTPEVRLNIISSLDKVNEVIGAAQLSTSLLPAIVGLAEDGKWRVRLA 424
Query: 187 AAEACAVVASLLAPEDMEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDL 366
+ ++AS L E ++ ++P D + +R EL Q G + A T++
Sbjct: 425 IVQFMPLLASQLGQEFFDEKLLPLCLNWLTDHVFSIREASTLIMKELTQKFGGQWASTNI 484
Query: 367 AQIFQALLKDSEAEVRAAAAGKVKDFCMN-LDKAHQEHIIMTMILPQIKDLVCD 525
Q L KD+ R FC+N L +A + I+ I+P +KDLV D
Sbjct: 485 VPKMQKLQKDTNYLQRMTCL-----FCLNTLSEAMTQEQILKEIMPIVKDLVED 533
Score = 46.4 bits (105), Expect = 1e-05
Identities = 39/166 (23%), Positives = 67/166 (40%)
Frame = +1
Query: 34 LCQDDTPMVRRAAAYKLGEFAKVVEIEYVKSDLIPIFVFLAKDDQDSVRLLAAEACAVVA 213
L D +V+ A + A ++ E S+L+PI++ L D VRL + V
Sbjct: 335 LVTDGNQLVKSELAGVIMGLAPLIGKEQTVSELLPIYMQLLNDQTPEVRLNIISSLDKVN 394
Query: 214 SLLAPEDMEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIFQALLK 393
++ + ++P + A D WRVR + L +G E L + L
Sbjct: 395 EVIGAAQLSTSLLPAIVGLAEDGKWRVRLAIVQFMPLLASQLGQEFFDEKLLPLCLNWLT 454
Query: 394 DSEAEVRAAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDAN 531
D +R A+ +K+ L + T I+P+++ L D N
Sbjct: 455 DHVFSIREASTLIMKE----LTQKFGGQWASTNIVPKMQKLQKDTN 496
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +1
Query: 40 QDDTPMVRRAAA-YKLGEFAKVVEIEYVKSDLIPIFVFLAKDDQDSVRLLAAEACAVVAS 216
Q DT ++R + L ++ + E + +++PI L +DD +VR AA++ +
Sbjct: 492 QKDTNYLQRMTCLFCLNTLSEAMTQEQILKEIMPIVKDLVEDDVPNVRFNAAKSLKRIGK 551
Query: 217 LLAPEDMEQHVMPTVRARAGDTSWRVRY 300
L P + V P + D+ + VRY
Sbjct: 552 NLTPSTLTSEVKPLLEKLGKDSDFDVRY 579
Score = 37.9 bits (84), Expect = 0.005
Identities = 23/119 (19%), Positives = 52/119 (43%)
Frame = +1
Query: 58 VRRAAAYKLGEFAKVVEIEYVKSDLIPIFVFLAKDDQDSVRLLAAEACAVVASLLAPEDM 237
+R A+ + E + ++ ++++P L KD R+ ++ + E +
Sbjct: 460 IREASTLIMKELTQKFGGQWASTNIVPKMQKLQKDTNYLQRMTCLFCLNTLSEAMTQEQI 519
Query: 238 EQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIFQALLKDSEAEVR 414
+ +MP V+ D VR+ A + + + P +++ + + L KDS+ +VR
Sbjct: 520 LKEIMPIVKDLVEDDVPNVRFNAAKSLKRIGKNLTPSTLTSEVKPLLEKLGKDSDFDVR 578
>Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical protein
F16A11.3b protein.
Length = 1364
Score = 39.9 bits (89), Expect = 0.001
Identities = 40/167 (23%), Positives = 67/167 (40%), Gaps = 11/167 (6%)
Frame = +1
Query: 13 LRQHFCSLCQDDTPMVRRAAAYKLGEFAKVVEIEYVKSDLIPIFVFLAKDDQDSVRLLAA 192
L+ F L D+ VR++ ++ + E A ++ E DL+P+F L D VR
Sbjct: 864 LKLVFRKLAMDEQARVRQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDVRNGIL 923
Query: 193 EACAVVASLLAPEDMEQHVM-----------PTVRARAGDTSWRVRYMVADKFVELQQAV 339
L+PE ++ ++ P +A+ GD WR R+ + + +L
Sbjct: 924 IHLYDFVKFLSPEKRDEMILSLPQFFPIGAQPGNQAQNGD--WRSRFELISQLSKLCSLY 981
Query: 340 GPELARTDLAQIFQALLKDSEAEVRAAAAGKVKDFCMNLDKAHQEHI 480
+ ++ I L D AEVR A V L A ++I
Sbjct: 982 SIQDVNFHMSGIALTLADDRVAEVRREAVMLVSTIVGALVTAEWDNI 1028
>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical protein
F16A11.3a protein.
Length = 1490
Score = 39.9 bits (89), Expect = 0.001
Identities = 40/167 (23%), Positives = 67/167 (40%), Gaps = 11/167 (6%)
Frame = +1
Query: 13 LRQHFCSLCQDDTPMVRRAAAYKLGEFAKVVEIEYVKSDLIPIFVFLAKDDQDSVRLLAA 192
L+ F L D+ VR++ ++ + E A ++ E DL+P+F L D VR
Sbjct: 990 LKLVFRKLAMDEQARVRQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDVRNGIL 1049
Query: 193 EACAVVASLLAPEDMEQHVM-----------PTVRARAGDTSWRVRYMVADKFVELQQAV 339
L+PE ++ ++ P +A+ GD WR R+ + + +L
Sbjct: 1050 IHLYDFVKFLSPEKRDEMILSLPQFFPIGAQPGNQAQNGD--WRSRFELISQLSKLCSLY 1107
Query: 340 GPELARTDLAQIFQALLKDSEAEVRAAAAGKVKDFCMNLDKAHQEHI 480
+ ++ I L D AEVR A V L A ++I
Sbjct: 1108 SIQDVNFHMSGIALTLADDRVAEVRREAVMLVSTIVGALVTAEWDNI 1154
>Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical protein
F16A11.3b protein.
Length = 1364
Score = 39.9 bits (89), Expect = 0.001
Identities = 40/167 (23%), Positives = 67/167 (40%), Gaps = 11/167 (6%)
Frame = +1
Query: 13 LRQHFCSLCQDDTPMVRRAAAYKLGEFAKVVEIEYVKSDLIPIFVFLAKDDQDSVRLLAA 192
L+ F L D+ VR++ ++ + E A ++ E DL+P+F L D VR
Sbjct: 864 LKLVFRKLAMDEQARVRQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDVRNGIL 923
Query: 193 EACAVVASLLAPEDMEQHVM-----------PTVRARAGDTSWRVRYMVADKFVELQQAV 339
L+PE ++ ++ P +A+ GD WR R+ + + +L
Sbjct: 924 IHLYDFVKFLSPEKRDEMILSLPQFFPIGAQPGNQAQNGD--WRSRFELISQLSKLCSLY 981
Query: 340 GPELARTDLAQIFQALLKDSEAEVRAAAAGKVKDFCMNLDKAHQEHI 480
+ ++ I L D AEVR A V L A ++I
Sbjct: 982 SIQDVNFHMSGIALTLADDRVAEVRREAVMLVSTIVGALVTAEWDNI 1028
>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical protein
F16A11.3a protein.
Length = 1490
Score = 39.9 bits (89), Expect = 0.001
Identities = 40/167 (23%), Positives = 67/167 (40%), Gaps = 11/167 (6%)
Frame = +1
Query: 13 LRQHFCSLCQDDTPMVRRAAAYKLGEFAKVVEIEYVKSDLIPIFVFLAKDDQDSVRLLAA 192
L+ F L D+ VR++ ++ + E A ++ E DL+P+F L D VR
Sbjct: 990 LKLVFRKLAMDEQARVRQSISHSIHEIANMLGQEITDEDLLPVFYDLRNDQNPDVRNGIL 1049
Query: 193 EACAVVASLLAPEDMEQHVM-----------PTVRARAGDTSWRVRYMVADKFVELQQAV 339
L+PE ++ ++ P +A+ GD WR R+ + + +L
Sbjct: 1050 IHLYDFVKFLSPEKRDEMILSLPQFFPIGAQPGNQAQNGD--WRSRFELISQLSKLCSLY 1107
Query: 340 GPELARTDLAQIFQALLKDSEAEVRAAAAGKVKDFCMNLDKAHQEHI 480
+ ++ I L D AEVR A V L A ++I
Sbjct: 1108 SIQDVNFHMSGIALTLADDRVAEVRREAVMLVSTIVGALVTAEWDNI 1154
>Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical protein
F16A11.3c protein.
Length = 1046
Score = 32.7 bits (71), Expect = 0.17
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +1
Query: 13 LRQHFCSLCQDDTPMVRRAAAYKLGEFAKVVEIEYVKSDLIPIFVFLAKDDQDSV 177
L+ F L D+ VR++ ++ + E A ++ E DL+P+F L+ Q SV
Sbjct: 990 LKLVFRKLAMDEQARVRQSISHSIHEIANMLGQEITDEDLLPVFYDLSSCRQKSV 1044
>Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical protein
F16A11.3c protein.
Length = 1046
Score = 32.7 bits (71), Expect = 0.17
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +1
Query: 13 LRQHFCSLCQDDTPMVRRAAAYKLGEFAKVVEIEYVKSDLIPIFVFLAKDDQDSV 177
L+ F L D+ VR++ ++ + E A ++ E DL+P+F L+ Q SV
Sbjct: 990 LKLVFRKLAMDEQARVRQSISHSIHEIANMLGQEITDEDLLPVFYDLSSCRQKSV 1044
>AF003136-1|AAK21379.3| 896|Caenorhabditis elegans Importin beta
family protein 1 protein.
Length = 896
Score = 31.1 bits (67), Expect = 0.53
Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 7/106 (6%)
Frame = +1
Query: 160 DDQDSVRLLAAEACAVVASLLAPEDMEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAV 339
DD D AA C ++A+ +D+ HV+P + + W+ + F +
Sbjct: 345 DDDDWTPAKAAGVCLMLAAQCVRDDIVNHVIPFFK-HFQNPDWKYKEAAIMAFGSILDGP 403
Query: 340 GPE----LARTDLAQIFQALLKDSEAEVRAAAA---GKVKDFCMNL 456
P+ +A+ L I A+ D VR AA G+V D C L
Sbjct: 404 DPKKLLPMAQEALPAIVAAMC-DKNVNVRDTAAWSLGRVIDTCSEL 448
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 30.3 bits (65), Expect = 0.93
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = -1
Query: 239 SISSGASREATTAHASAASKRTESWSSFAKNTKMGMRSLLTY--SISTTLANSPSL*AAA 66
S S+ + A+TA + S + S +++T + M SL TY S ST A SP+ +
Sbjct: 429 SPSTAGTSLASTAVTTETSIGSSSTPLPSQSTSLSMSSLSTYTPSSSTAGATSPATQQST 488
Query: 65 RRTIGVS 45
+ TIG S
Sbjct: 489 KPTIGTS 495
>Z75549-1|CAA99917.1| 424|Caenorhabditis elegans Hypothetical
protein T19C4.1 protein.
Length = 424
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = -2
Query: 259 RSASHVAPYPRVPAEKPQQHMPLRLANVPSLGHPLPKTQ 143
R A H P P PQ H A VPS+GHP+P +Q
Sbjct: 189 REAMHSHSGPFYPLGTPQIHSRPPSA-VPSMGHPVPLSQ 226
>AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical
protein Y41D4B.18 protein.
Length = 338
Score = 29.9 bits (64), Expect = 1.2
Identities = 24/82 (29%), Positives = 36/82 (43%)
Frame = -1
Query: 341 PTACCSSTNLSATMYRTLHEVSPARARTVGITCCSISSGASREATTAHASAASKRTESWS 162
PT + TN S T T + T + S + TT+ + AS+ T S
Sbjct: 252 PTTTGAPTN-STTNPPTATSPKTSSQPVSSSTSSTSSPAPTNPPTTSRPTTASQSTAS-Q 309
Query: 161 SFAKNTKMGMRSLLTYSISTTL 96
+ TK+G+ + +T SI TTL
Sbjct: 310 NVETTTKLGLTASITVSIMTTL 331
>AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical
protein B0205.10 protein.
Length = 455
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = -2
Query: 265 PARSASHVAPYPRVPAEKPQQHMPLRLANVPSLGHPLPK 149
P + VAP P PA P+ P + P + P P+
Sbjct: 114 PVQETPQVAPAPETPAPAPETPAPAPVQETPQVVAPAPE 152
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.7 bits (61), Expect = 2.8
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = -1
Query: 350 SSGPTACCSSTNLSATMYRTLHEVSPARARTVGITCCSIS-SGASREATTAHASAASKRT 174
S+ ++ SST ++ SP+ T T S S +G S ++T ++A+S +
Sbjct: 460 STVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSSVS 519
Query: 173 ESWSSFAKNTKMGMRSLLTYSISTT 99
+ SS +T S T S +TT
Sbjct: 520 STASSTQSSTSTQQSSTTTKSETTT 544
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.7 bits (61), Expect = 2.8
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = -1
Query: 350 SSGPTACCSSTNLSATMYRTLHEVSPARARTVGITCCSIS-SGASREATTAHASAASKRT 174
S+ ++ SST ++ SP+ T T S S +G S ++T ++A+S +
Sbjct: 460 STVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSSVS 519
Query: 173 ESWSSFAKNTKMGMRSLLTYSISTT 99
+ SS +T S T S +TT
Sbjct: 520 STASSTQSSTSTQQSSTTTKSETTT 544
>U97407-9|AAL02457.2| 1768|Caenorhabditis elegans Hypothetical protein
C34G6.1 protein.
Length = 1768
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -3
Query: 165 VILCQKHKDG-NEIALDVFDFYDFSELPKFVGGSASH 58
++ Q+ K G +A D+FD+ S F G S+SH
Sbjct: 925 ILPMQREKSGLKTLAFDIFDYASSSVFSTFSGSSSSH 961
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 28.3 bits (60), Expect = 3.7
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -2
Query: 310 QRPCTAPSTKYLRHEPARSASHVAPYPRVPAEKPQ 206
+RP A Y+ PAR A ++ P P +PQ
Sbjct: 211 ERPVPARPAPYIEPTPARPAPYIEPSTAKPQPRPQ 245
>Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical
protein M163.11 protein.
Length = 224
Score = 27.9 bits (59), Expect = 4.9
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = -1
Query: 248 TCCSISSGASREATTAHASAASKRTESWSSFAKNTKMGMRSLLTYSISTTLANSPSL*AA 69
T S S+ A+ ++ +S++S + S +S + T S + STT +NS S ++
Sbjct: 54 TSSSSSTAATSSDDSSSSSSSSSSSASSTSSSDTTTADSSSTTSSDSSTTSSNSSSSTSS 113
Query: 68 ARRTIGVSSWQS 33
+ T VSS S
Sbjct: 114 SDSTSVVSSTSS 125
>U61945-5|AAB03128.1| 517|Caenorhabditis elegans Hypothetical
protein C49C8.1 protein.
Length = 517
Score = 27.9 bits (59), Expect = 4.9
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 277 DTSWRVRYMVADKFVELQQAVGPELARTDL 366
D W + YMVA+ FVEL E+A +L
Sbjct: 295 DDIWSLMYMVAEFFVELPWTSNEEIALEEL 324
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 27.9 bits (59), Expect = 4.9
Identities = 18/62 (29%), Positives = 26/62 (41%)
Frame = -2
Query: 358 YELALDQQLVAALRTYQRPCTAPSTKYLRHEPARSASHVAPYPRVPAEKPQQHMPLRLAN 179
Y+LA Q +AA+++ PC K + PR+P K LRL N
Sbjct: 749 YKLATQQMYLAAIKSNTHPCRDLKAK-------GQLERTSKPPRIPPLKLSDSEKLRLDN 801
Query: 178 VP 173
+P
Sbjct: 802 IP 803
>AF067946-4|AAC17683.1| 345|Caenorhabditis elegans Hypothetical
protein W02G9.3 protein.
Length = 345
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/70 (21%), Positives = 33/70 (47%)
Frame = +1
Query: 313 KFVELQQAVGPELARTDLAQIFQALLKDSEAEVRAAAAGKVKDFCMNLDKAHQEHIIMTM 492
+F++ V LA DL+++ + L+K ++A GK+ + + + + +
Sbjct: 226 RFLQRVYPVEHTLA-VDLSKMNEVLMKVISDTLKADGTGKLPTYSVEFKARNNDSVAKNS 284
Query: 493 ILPQIKDLVC 522
+L + D VC
Sbjct: 285 VLQMVDDAVC 294
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,165,811
Number of Sequences: 27780
Number of extensions: 241402
Number of successful extensions: 928
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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