Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0456
         (539 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   2.0  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   4.6  
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          21   6.1  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   6.1  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   8.1  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   8.1  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = +1

Query: 58  VRRAAAYKLGEFAKVVEIEYVKSDLIPIFVFLAKDDQDSVRLLAAEACAVVASLL 222
           VR       GE+  VV   Y K+       ++ +DD   VR++A    AVV  L+
Sbjct: 495 VRAKTTRGWGEYTPVV---YKKTPHAMGLDYVGEDDNMQVRIIAGAIVAVVVLLV 546


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = -2

Query: 361 LYELALDQQLVAALRTYQRPCTAPSTKYLRHEPARSASHV 242
           LYELAL+Q +   LR         + K L+++  +   ++
Sbjct: 317 LYELALNQDVQKKLREEINTFCPKNNKELKYDDIKEMEYL 356


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 300 VPHPPRSISGT 268
           VP PPRS+ G+
Sbjct: 56  VPQPPRSLEGS 66


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -3

Query: 519 HQVLDLWQDHGHDDVFLMSFIQVHT 445
           HQ+  L Q H      L SF+Q H+
Sbjct: 72  HQMQQLLQQHILSPTQLQSFMQQHS 96


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 362 SVRASSGPTACCSS 321
           S  ASS PT+ CSS
Sbjct: 594 SSSASSAPTSVCSS 607


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 235 YPRVPAEKPQQHMPLR 188
           YP +  E P+ H P+R
Sbjct: 70  YPLLRFENPETHHPIR 85


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,231
Number of Sequences: 438
Number of extensions: 2888
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15336375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)