Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0455
         (353 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71181-5|CAA94898.1|  355|Caenorhabditis elegans Hypothetical pr...    26   6.6  
U55376-5|AAA98007.1|  501|Caenorhabditis elegans Hypothetical pr...    26   6.6  

>Z71181-5|CAA94898.1|  355|Caenorhabditis elegans Hypothetical
           protein K07C5.5 protein.
          Length = 355

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 333 YNCNRDRKNNKTYKYLFVQKYI 268
           YN +++++N   Y YLF  +YI
Sbjct: 187 YNMSKEQRNKSWYIYLFQSQYI 208


>U55376-5|AAA98007.1|  501|Caenorhabditis elegans Hypothetical
           protein F16H11.1 protein.
          Length = 501

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +1

Query: 55  W*VWFGHELLIVSDLFPMLFILFIDINT*YF 147
           W  WFGH       L  ML  L+I+I+  YF
Sbjct: 272 WTSWFGHVQFYQIALLYMLSRLYINISQVYF 302


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,273,554
Number of Sequences: 27780
Number of extensions: 96219
Number of successful extensions: 215
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 215
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 471339352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)