Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0455
         (353 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    22   1.9  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    21   3.3  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   3.3  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    20   7.5  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    20   7.5  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    20   7.5  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    20   7.5  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    20   9.9  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    20   9.9  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    20   9.9  

>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -3

Query: 249 FKNXK***FNNKIIILHNIWVFHRST 172
           FKN K   F+   I  H +W++H  T
Sbjct: 94  FKNAKKVTFHEMSIPNHYLWLYHDKT 119


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 324 NRDRKNNKTYKYLFVQKY 271
           N+   NN  YKY +  KY
Sbjct: 87  NKTIHNNNNYKYNYNNKY 104


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 79  IHDQTKLTTILDILF*FKIRVNS 11
           IH+ +    ++D +F F  RVNS
Sbjct: 307 IHNSSNARFLMDSMFDFAERVNS 329


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -3

Query: 336 QYNCNRDRKNNKTYKYLFVQKYIQK 262
           +YN N +  NN   K  +   YI++
Sbjct: 97  KYNYNNNNYNNNCKKLYYNINYIEQ 121


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -3

Query: 336 QYNCNRDRKNNKTYKYLFVQKYIQK 262
           +YN N +  NN   K  +   YI++
Sbjct: 97  KYNYNNNNYNNNCKKLYYNINYIEQ 121


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -3

Query: 336 QYNCNRDRKNNKTYKYLFVQKYIQK 262
           +YN N +  NN   K  +   YI++
Sbjct: 97  KYNYNNNNYNNNCKKLYYNINYIEQ 121


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -3

Query: 336 QYNCNRDRKNNKTYKYLFVQKYIQK 262
           +YN N +  NN   K  +   YI++
Sbjct: 97  KYNYNNNNYNNNCKKLYYNINYIEQ 121


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +1

Query: 100 FPMLFILFI 126
           FP+LF+LFI
Sbjct: 370 FPILFMLFI 378


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +3

Query: 285 RDIYKFYYFCDLYCNYTV 338
           R  + F+YF   Y NY +
Sbjct: 211 RITHNFFYFDPRYGNYNI 228


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 54  QSWTFCFNLKYV 19
           ++WTFC   +YV
Sbjct: 521 KTWTFCGTPEYV 532


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,026
Number of Sequences: 438
Number of extensions: 1769
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8184330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)