Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0454
         (831 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0124 + 971213-971341,971741-971769,971877-972078,972839-97...    90   2e-18
05_01_0119 + 820566-820739,822708-822737,823153-823266,823341-82...    65   6e-11
06_03_0629 + 22920206-22920291,22920430-22920527,22920657-229207...    51   1e-06
05_05_0024 + 21613199-21613208,21613466-21613560,21613656-216137...    31   1.1  
02_04_0605 - 24290777-24290830,24290914-24291075,24291494-242916...    29   4.5  
02_05_1321 - 35695474-35696161,35696315-35696547                       29   6.0  
10_01_0222 - 2387703-2387744,2387797-2388119,2388170-2388251           28   7.9  
03_04_0174 - 18044516-18046327                                         28   7.9  
03_01_0266 - 2057354-2057638,2057762-2058022,2058342-2058778,205...    28   7.9  

>03_01_0124 +
           971213-971341,971741-971769,971877-972078,972839-973081,
           973172-973273,973743-974180
          Length = 380

 Score = 89.8 bits (213), Expect = 2e-18
 Identities = 51/152 (33%), Positives = 90/152 (59%), Gaps = 3/152 (1%)
 Frame = +3

Query: 384 ITNYSQLTQFLCCSIFVFIFYLAYGYFLELIFAKPEVKPVSLYITLVQFMITMLLSYGES 563
           +T+  +  QFL CS   F  YL  G   E ++ + +      Y T VQ  + + L   + 
Sbjct: 16  LTDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFS-FGWYFTFVQGFVYLGLIRLQG 74

Query: 564 WIRNPIKRKV-PLKTYAVLAALTLGTMSFSNLALSYLNYPTQLIFKSCKLIPVMIGSIII 740
           +    +K+ V P +TY  L+A+ +G+   +  +L++LNYP Q++FKS K++PVMI    I
Sbjct: 75  FT---VKQMVNPWRTYVRLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFI 131

Query: 741 --MRKRYSFLDYVAAIVMCVGLTMFTLADSST 830
             +R++Y F +Y++A+++ +GL +FTLAD+ +
Sbjct: 132 PGLRRKYPFHEYISAVMLVIGLILFTLADAQS 163


>05_01_0119 +
           820566-820739,822708-822737,823153-823266,823341-823433,
           823521-823586,824076-824174,824480-824559,825039-825151,
           825600-825688,825955-826041,826128-826130,826285-826383
          Length = 348

 Score = 65.3 bits (152), Expect = 6e-11
 Identities = 32/78 (41%), Positives = 48/78 (61%)
 Frame = +3

Query: 594 PLKTYAVLAALTLGTMSFSNLALSYLNYPTQLIFKSCKLIPVMIGSIIIMRKRYSFLDYV 773
           PL+ Y V++   + T +    AL Y+++P Q + K  K+IPVMI   IIMRK+Y   DY 
Sbjct: 117 PLQKYCVVSVSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTIIMRKKYGGKDYF 176

Query: 774 AAIVMCVGLTMFTLADSS 827
            A+V+ VG ++F L  +S
Sbjct: 177 FAVVVTVGCSLFILYPAS 194


>06_03_0629 +
           22920206-22920291,22920430-22920527,22920657-22920796,
           22921596-22921626,22922025-22922128,22922439-22922560,
           22922651-22923050,22923245-22923268
          Length = 334

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
 Frame = +3

Query: 588 KVPLKTY-AVLAALTLGTMSFSNLALSYLNYPTQLIFKSCKLIPVMIGSIIIMRKRYSFL 764
           + PL+ Y  V    T+G  +    AL +++YP Q++ KS K+IPVM+   I+   +Y+F 
Sbjct: 76  RAPLRKYWGVSITNTVGP-AMGIEALKFISYPAQVLAKSSKMIPVMLMGTILYGVKYTFP 134

Query: 765 DYVAAIVMCVGLTMFTLADSST 830
           +Y+   ++  G++ F L  +S+
Sbjct: 135 EYICTFLVAGGVSSFALLKTSS 156


>05_05_0024 +
           21613199-21613208,21613466-21613560,21613656-21613713,
           21613843-21614037,21614237-21614316,21614402-21614512
          Length = 182

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
 Frame = +3

Query: 534 ITMLLSYGESWIRNPIKRKVPLKTYAVLAALTLGTMSFSNLALSYLNYPTQLIFKSCKLI 713
           + + L YG   +    K  +P   Y  LA + +     +  A  Y +Y T +   +C  I
Sbjct: 17  LLLALVYGPVLLHRQRKFLMPWYWYLALAFIDVQGNCLAIKAYHY-SYITSVNLLNCWTI 75

Query: 714 P-VMIGSIIIMRKRYSFLDYVAAIVMCVGLTMFTLADSS 827
             VMI +   +  RYS   +V A     GL +  L+DS+
Sbjct: 76  TWVMILTRFALGTRYSLWQFVGAGTCMTGLALVLLSDSN 114


>02_04_0605 -
           24290777-24290830,24290914-24291075,24291494-24291694,
           24291777-24291961,24292117-24292246
          Length = 243

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
 Frame = +3

Query: 513 ITLVQFMITMLLSYGESWIRNPIKRKVPLKTYAVLAALTLGTMSFSNLALSYLNYPTQLI 692
           +T + F  T L++    W+ +     +PL            ++   N++L + +     I
Sbjct: 47  LTGLHFATTTLMTLVMKWLGHIQPSYLPLPELVKFVFFANLSIVGMNVSLMWNSVGFYQI 106

Query: 693 FKSCKLIPVM-IGSIIIMRKRYSFLDYVAAIVMCVGLTMFTLADSS 827
            K C +IPV+ I  I+  + RYS    ++ +++ VG+ + T+ D S
Sbjct: 107 AKLC-IIPVLCILEILFDKVRYSRNTKLSIVLVLVGVAVCTVTDVS 151


>02_05_1321 - 35695474-35696161,35696315-35696547
          Length = 306

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -1

Query: 87 ADMF*IFMLLSGIIFKFVNKC 25
          A +F IF+LLS  +FK VN C
Sbjct: 36 AQIFLIFLLLSSFVFKAVNDC 56


>10_01_0222 - 2387703-2387744,2387797-2388119,2388170-2388251
          Length = 148

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = +3

Query: 327 IDDENSRTSKTEINILCFDI--TNYSQLTQ 410
           IDD NS   +TE+ +  FDI    Y QL+Q
Sbjct: 96  IDDPNSILVRTELGVFMFDIELNEYEQLSQ 125


>03_04_0174 - 18044516-18046327
          Length = 603

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -2

Query: 818 SQSKHSQSYTHNNCRYIIQKRITFSHYDNTTNHNWY 711
           S S  S  +THN+  Y      + SHY+N +N N+Y
Sbjct: 38  STSSPSSHHTHNHTYY----HHSHSHYNNNSNTNYY 69


>03_01_0266 -
           2057354-2057638,2057762-2058022,2058342-2058778,
           2058889-2059213
          Length = 435

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = -1

Query: 693 ISIELDSSNNLKLNSKMTLFLMSMQLKLHTFL 598
           ISI+LD+  N  L  ++TL + S  + ++TF+
Sbjct: 353 ISIQLDNKRNELLGLQLTLIIASFGIAINTFI 384


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,328,108
Number of Sequences: 37544
Number of extensions: 310853
Number of successful extensions: 647
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 645
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2291695380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)