Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0454
         (831 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_37712| Best HMM Match : No HMM Matches (HMM E-Value=.)              55   8e-08
SB_9163| Best HMM Match : XS (HMM E-Value=0.84)                        30   2.0  
SB_59608| Best HMM Match : DiS_P_DiS (HMM E-Value=8.5)                 29   4.6  
SB_50321| Best HMM Match : 7tm_1 (HMM E-Value=1.3e-32)                 29   6.1  
SB_8562| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   6.1  
SB_49516| Best HMM Match : Hydrolase (HMM E-Value=1.3e-29)             28   8.1  
SB_30774| Best HMM Match : Vpu (HMM E-Value=5.7)                       28   8.1  
SB_8281| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   8.1  

>SB_37712| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 537

 Score = 54.8 bits (126), Expect = 8e-08
 Identities = 25/83 (30%), Positives = 51/83 (61%)
 Frame = +3

Query: 570 RNPIKRKVPLKTYAVLAALTLGTMSFSNLALSYLNYPTQLIFKSCKLIPVMIGSIIIMRK 749
           R P + + PL  Y+  +   + +      AL ++++PTQ++ K+ K+IPVM+   ++ +K
Sbjct: 203 RQP-QHRAPLYKYSYSSFSNIMSSWCQYEALKFVSFPTQVLCKASKIIPVMLMGKLVSKK 261

Query: 750 RYSFLDYVAAIVMCVGLTMFTLA 818
            Y + +Y  A+V+ VG+++F L+
Sbjct: 262 SYPYYEYFIAVVLSVGVSLFLLS 284


>SB_9163| Best HMM Match : XS (HMM E-Value=0.84)
          Length = 424

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 20/69 (28%), Positives = 32/69 (46%)
 Frame = +3

Query: 276 METSSDKMNSVKETFIRIDDENSRTSKTEINILCFDITNYSQLTQFLCCSIFVFIFYLAY 455
           +ET S   ++V  T +        T+K+ +NI      N     + L C IF+    LAY
Sbjct: 129 VETGSKAASTVMSTTVTTITTPVETTKSTVNIPTTMAPNPKTELRNLNCKIFLVAMRLAY 188

Query: 456 GYFLELIFA 482
            +  EL+F+
Sbjct: 189 PWNRELMFS 197


>SB_59608| Best HMM Match : DiS_P_DiS (HMM E-Value=8.5)
          Length = 370

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
 Frame = +3

Query: 270 CVMETSSDKMNSVKETFIRIDDENSRTSKTEINILCFDITN----YSQLTQFLC 419
           C  E  SD+ NS   +      EN+ ++ ++IN L  +I      + +L  +LC
Sbjct: 160 CFQEAGSDRENSSPSSHSNSASENNNSASSQINALDHNIRKCDSLFQELNSYLC 213


>SB_50321| Best HMM Match : 7tm_1 (HMM E-Value=1.3e-32)
          Length = 395

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
 Frame = +3

Query: 405 TQFLCCSIFVF-----IFYLAYG--YFLE----LIFAKPEVKPVSLYI 515
           T+FL C  F+F     + YLA G  Y       L F KP +KP SLY+
Sbjct: 142 TRFLICGTFLFACFAPVPYLASGEKYTFNPGKGLCFQKPNLKPASLYV 189


>SB_8562| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 145

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +3

Query: 390 NYSQLTQFLCCSIFVFIFYL 449
           N SQ + FLC S+ +F+F+L
Sbjct: 7   NTSQFSAFLCTSVSIFVFFL 26


>SB_49516| Best HMM Match : Hydrolase (HMM E-Value=1.3e-29)
          Length = 203

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 734 YHNEKTLFVFGLCSGNCYVCRTDYVY 811
           YH +K LF+ GL + N   C   YVY
Sbjct: 76  YHRKKKLFLKGLSTVNSIPCVVKYVY 101


>SB_30774| Best HMM Match : Vpu (HMM E-Value=5.7)
          Length = 161

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
 Frame = -3

Query: 382 SKHNILISVFDVLLFSSSILMKVSFTEFILSDDV--SITHHL 263
           S+H  LI +  V++F+ +I++ ++FT  I+   +  +I HH+
Sbjct: 57  SQHYYLIDIIIVVIFTINIIITINFTIIIIIIIIIFNINHHI 98


>SB_8281| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 265

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
 Frame = -3

Query: 358 VFDV-LLFSSSILMKVSFT-EFILSDDVSITHHLCLFLF*WLK 236
           VF V ++FS  ++++V+    F+L+DDV++  +L   +F W K
Sbjct: 196 VFSVDVVFSFDVVIRVNADITFVLTDDVAVVDNLSGVMFFWKK 238


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,683,700
Number of Sequences: 59808
Number of extensions: 411409
Number of successful extensions: 885
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2335516755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)