Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0454
(831 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00067-9|AAK20073.1| 364|Caenorhabditis elegans Hypothetical pr... 152 3e-37
U00067-10|ABD94100.1| 247|Caenorhabditis elegans Hypothetical p... 85 8e-17
AL132904-16|CAC35849.1| 340|Caenorhabditis elegans Hypothetical... 73 2e-13
Z68215-8|CAA92454.1| 318|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AF016441-6|AAX55687.1| 440|Caenorhabditis elegans Paps (adenosi... 46 3e-05
AF016441-5|AAX55688.1| 408|Caenorhabditis elegans Paps (adenosi... 46 3e-05
AF016441-4|AAX55686.1| 425|Caenorhabditis elegans Paps (adenosi... 46 3e-05
U49829-8|AAV28348.1| 515|Caenorhabditis elegans Hypothetical pr... 31 1.0
U49829-7|AAA93388.3| 513|Caenorhabditis elegans Hypothetical pr... 31 1.0
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 7.1
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 7.1
>U00067-9|AAK20073.1| 364|Caenorhabditis elegans Hypothetical
protein F54E7.1a protein.
Length = 364
Score = 152 bits (369), Expect = 3e-37
Identities = 73/154 (47%), Positives = 102/154 (66%)
Frame = +3
Query: 363 INILCFDITNYSQLTQFLCCSIFVFIFYLAYGYFLELIFAKPEVKPVSLYITLVQFMITM 542
I++L F+I + QF+ S+ +FI Y+ YGY ELIF P +KP +TL+QF+I
Sbjct: 26 IHLLGFNIARKPKWLQFVLLSLAIFILYIGYGYMQELIFKLPGMKPFGWTLTLIQFLIYS 85
Query: 543 LLSYGESWIRNPIKRKVPLKTYAVLAALTLGTMSFSNLALSYLNYPTQLIFKSCKLIPVM 722
Y E I + KR +P + Y V+A T+ TM SN ++ YLNYPTQ+IFK CKLIPV+
Sbjct: 86 GCGYTECIIWHNTKRMIPWRIYGVIAFFTVATMGLSNASVGYLNYPTQVIFKCCKLIPVL 145
Query: 723 IGSIIIMRKRYSFLDYVAAIVMCVGLTMFTLADS 824
IG I+I KRY ++D AA++M +G+ MFTLAD+
Sbjct: 146 IGGILIQGKRYGWIDIGAAMLMSLGIIMFTLADN 179
>U00067-10|ABD94100.1| 247|Caenorhabditis elegans Hypothetical
protein F54E7.1b protein.
Length = 247
Score = 84.6 bits (200), Expect = 8e-17
Identities = 37/62 (59%), Positives = 49/62 (79%)
Frame = +3
Query: 639 MSFSNLALSYLNYPTQLIFKSCKLIPVMIGSIIIMRKRYSFLDYVAAIVMCVGLTMFTLA 818
M SN ++ YLNYPTQ+IFK CKLIPV+IG I+I KRY ++D AA++M +G+ MFTLA
Sbjct: 1 MGLSNASVGYLNYPTQVIFKCCKLIPVLIGGILIQGKRYGWIDIGAAMLMSLGIIMFTLA 60
Query: 819 DS 824
D+
Sbjct: 61 DN 62
>AL132904-16|CAC35849.1| 340|Caenorhabditis elegans Hypothetical
protein Y111B2A.20 protein.
Length = 340
Score = 73.3 bits (172), Expect = 2e-13
Identities = 50/139 (35%), Positives = 71/139 (51%), Gaps = 6/139 (4%)
Frame = +3
Query: 411 FLCCSIFVFIFYLAYGYFLE-LIFAKPEVKPVSLY-ITLVQFMITMLLSYGESW---IRN 575
FL C+ + I Y +G E ++ K E+ S+ T Q ++ L + + IR
Sbjct: 24 FLICAGGILICYFVFGIQQERIVQGKYELPDESIEKFTFTQALVFFLCTANTIYAFLIRK 83
Query: 576 PIK-RKVPLKTYAVLAALTLGTMSFSNLALSYLNYPTQLIFKSCKLIPVMIGSIIIMRKR 752
+ VP K YA AA L M SN AL YL YPTQ++ KSCK IPVMI ++ K
Sbjct: 84 KTEIDNVPTKMYAASAASYLLAMVASNQALQYLPYPTQVLAKSCKPIPVMIFGVLFAHKS 143
Query: 753 YSFLDYVAAIVMCVGLTMF 809
Y + Y +++ VG+ MF
Sbjct: 144 YHWRKYCYVLMIVVGVAMF 162
>Z68215-8|CAA92454.1| 318|Caenorhabditis elegans Hypothetical
protein C53B4.6 protein.
Length = 318
Score = 50.4 bits (115), Expect = 2e-06
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +3
Query: 579 IKRKVPLKTYAVLAALTLGTMSFSNLALSYLNY-PTQLIFKSCKLIPVMIGSIIIMRKRY 755
+ ++P+K+YA + A+ +NLAL + Y P +IFKS L+ M II +Y
Sbjct: 56 VPNRIPIKSYAKIVAIFFTVNMTNNLALKFAIYFPLFIIFKSGTLLTNMTMGWIIRNYQY 115
Query: 756 SFLDYVAAIVMCVGLTMFTLA 818
S A +V+ G+ +FTLA
Sbjct: 116 SLKQISAVVVVTAGIVIFTLA 136
>AF016441-6|AAX55687.1| 440|Caenorhabditis elegans Paps (adenosine
3'-phosphate 5'-phosphosulfate) transporter protein 1,
isoform b protein.
Length = 440
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/107 (22%), Positives = 52/107 (48%)
Frame = +3
Query: 507 LYITLVQFMITMLLSYGESWIRNPIKRKVPLKTYAVLAALTLGTMSFSNLALSYLNYPTQ 686
++ + ++ L+ + W + P PL ++ + + AL Y+++PTQ
Sbjct: 166 IFCNRIVALVLSLMILAKDWTKQP-PHVPPLYVHSYTSFSNTISSWCQYEALKYVSFPTQ 224
Query: 687 LIFKSCKLIPVMIGSIIIMRKRYSFLDYVAAIVMCVGLTMFTLADSS 827
I K+ K++ M+ ++ +RYS+ +Y + G ++F L+ SS
Sbjct: 225 TICKASKVVVTMLMGRLVRGQRYSWFEYGCGCTIAFGASLFLLSSSS 271
>AF016441-5|AAX55688.1| 408|Caenorhabditis elegans Paps (adenosine
3'-phosphate 5'-phosphosulfate) transporter protein 1,
isoform c protein.
Length = 408
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/107 (22%), Positives = 52/107 (48%)
Frame = +3
Query: 507 LYITLVQFMITMLLSYGESWIRNPIKRKVPLKTYAVLAALTLGTMSFSNLALSYLNYPTQ 686
++ + ++ L+ + W + P PL ++ + + AL Y+++PTQ
Sbjct: 166 IFCNRIVALVLSLMILAKDWTKQP-PHVPPLYVHSYTSFSNTISSWCQYEALKYVSFPTQ 224
Query: 687 LIFKSCKLIPVMIGSIIIMRKRYSFLDYVAAIVMCVGLTMFTLADSS 827
I K+ K++ M+ ++ +RYS+ +Y + G ++F L+ SS
Sbjct: 225 TICKASKVVVTMLMGRLVRGQRYSWFEYGCGCTIAFGASLFLLSSSS 271
>AF016441-4|AAX55686.1| 425|Caenorhabditis elegans Paps (adenosine
3'-phosphate 5'-phosphosulfate) transporter protein 1,
isoform a protein.
Length = 425
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/107 (22%), Positives = 52/107 (48%)
Frame = +3
Query: 507 LYITLVQFMITMLLSYGESWIRNPIKRKVPLKTYAVLAALTLGTMSFSNLALSYLNYPTQ 686
++ + ++ L+ + W + P PL ++ + + AL Y+++PTQ
Sbjct: 151 IFCNRIVALVLSLMILAKDWTKQP-PHVPPLYVHSYTSFSNTISSWCQYEALKYVSFPTQ 209
Query: 687 LIFKSCKLIPVMIGSIIIMRKRYSFLDYVAAIVMCVGLTMFTLADSS 827
I K+ K++ M+ ++ +RYS+ +Y + G ++F L+ SS
Sbjct: 210 TICKASKVVVTMLMGRLVRGQRYSWFEYGCGCTIAFGASLFLLSSSS 256
>U49829-8|AAV28348.1| 515|Caenorhabditis elegans Hypothetical
protein F27D9.8b protein.
Length = 515
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 92 KYINSELSELHKKRYNNRYFMSKNK*IFCF*LNPEENEKLNKVIYAY 232
+Y+N + E K R+ R+ + K + F + P +E LNK +Y Y
Sbjct: 293 EYLNDDDQEELKIRWQPRFLILKGSDVCFFDVPPLNSEDLNKCVYLY 339
>U49829-7|AAA93388.3| 513|Caenorhabditis elegans Hypothetical
protein F27D9.8a protein.
Length = 513
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 92 KYINSELSELHKKRYNNRYFMSKNK*IFCF*LNPEENEKLNKVIYAY 232
+Y+N + E K R+ R+ + K + F + P +E LNK +Y Y
Sbjct: 293 EYLNDDDQEELKIRWQPRFLILKGSDVCFFDVPPLNSEDLNKCVYLY 339
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 252 RNKHK*CVMETSSDKMNSVKETFIRIDDENSRTSKT 359
+N HK +T+ D M K + I DDE S +SKT
Sbjct: 13827 KNAHKDDTEKTTDDMMTRRKSSAIFSDDEQSISSKT 13862
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 252 RNKHK*CVMETSSDKMNSVKETFIRIDDENSRTSKT 359
+N HK +T+ D M K + I DDE S +SKT
Sbjct: 13827 KNAHKDDTEKTTDDMMTRRKSSAIFSDDEQSISSKT 13862
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,961,857
Number of Sequences: 27780
Number of extensions: 345253
Number of successful extensions: 1005
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1004
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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