Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0454
(831 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g23010.1 68417.m03319 UDP-galactose transporter-related conta... 91 1e-18
At1g12600.1 68414.m01463 hypothetical protein 88 6e-18
At5g59740.1 68418.m07488 UDP-galactose/UDP-glucose transporter-r... 59 3e-09
At3g46180.1 68416.m04997 UDP-galactose/UDP-glucose transporter-r... 57 2e-08
At2g02810.1 68415.m00226 UDP-galactose/UDP-glucose transporter c... 52 6e-07
At1g14360.1 68414.m01702 UDP-galactose/UDP-glucose transporter, ... 50 1e-06
At5g57100.1 68418.m07129 transporter-related low similarity to G... 33 0.18
At1g77210.1 68414.m08993 sugar transporter, putative similar to ... 33 0.31
At5g50630.1 68418.m06272 nodulin family protein similar to nodul... 30 2.2
At5g50520.1 68418.m06257 nodulin family protein similar to nodul... 30 2.2
At4g25190.1 68417.m03626 hypothetical protein contains Pfam pro... 29 5.0
At5g37180.1 68418.m04464 sucrose synthase, putative / sucrose-UD... 28 6.6
At5g19310.1 68418.m02301 homeotic gene regulator, putative simil... 28 8.7
At3g59360.2 68416.m06620 nucleotide-sugar transporter family pro... 28 8.7
At3g59360.1 68416.m06619 nucleotide-sugar transporter family pro... 28 8.7
>At4g23010.1 68417.m03319 UDP-galactose transporter-related contains
weak similarity to UDP-galactose transporter related
isozyme 1 (GI:1669562) [Mus musculus]
Length = 345
Score = 90.6 bits (215), Expect = 1e-18
Identities = 48/141 (34%), Positives = 82/141 (58%), Gaps = 2/141 (1%)
Frame = +3
Query: 408 QFLCCSIFVFIFYLAYGYFLELIFAKPEVKPVSLYITLVQFMITMLLSYGESWIRNPIKR 587
QFL C+ F YL G E ++ + + Y T +Q + + L Y + + I
Sbjct: 22 QFLICTSGFFFGYLVNGVCEEYVYNRLQFS-FGWYFTFIQGFVYLFLIYLQGFTTKHIVN 80
Query: 588 KVPLKTYAVLAALTLGTMSFSNLALSYLNYPTQLIFKSCKLIPVMIGSIII--MRKRYSF 761
P++TY L+A+ +G+ + +L+YLNYP Q++FKS K++PVMI I +R++Y
Sbjct: 81 --PMRTYVKLSAVLMGSHGLTKGSLAYLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPV 138
Query: 762 LDYVAAIVMCVGLTMFTLADS 824
+Y++A ++ +GL +FTLAD+
Sbjct: 139 HEYISAFLLVLGLILFTLADA 159
>At1g12600.1 68414.m01463 hypothetical protein
Length = 349
Score = 88.2 bits (209), Expect = 6e-18
Identities = 49/158 (31%), Positives = 87/158 (55%), Gaps = 2/158 (1%)
Frame = +3
Query: 363 INILCFDITNYSQLTQFLCCSIFVFIFYLAYGYFLELIFAKPEVKPVSLYITLVQFMITM 542
I + +++ + QFL CS F YL G E ++ + + Y T Q ++ +
Sbjct: 10 IKLFGIPLSDKPRWQQFLICSSGFFFGYLVNGICEEYVYNRLKFS-YGWYFTFAQGLVYI 68
Query: 543 LLSYGESWIRNPIKRKVPLKTYAVLAALTLGTMSFSNLALSYLNYPTQLIFKSCKLIPVM 722
L Y + + P KTY L+ + +G+ + +L+YLNYP Q++FKS K++PVM
Sbjct: 69 ALIYMYGFRTKQMVN--PWKTYVKLSGVLMGSHGLTKGSLAYLNYPAQIMFKSTKVLPVM 126
Query: 723 IGSIII--MRKRYSFLDYVAAIVMCVGLTMFTLADSST 830
+ I +R++Y +Y++A+++ +GL +FTLAD+ T
Sbjct: 127 VMGAFIPGLRRKYPVHEYISAMLLVIGLILFTLADAHT 164
>At5g59740.1 68418.m07488 UDP-galactose/UDP-glucose
transporter-related weak similarity to
UDP-galactose/UDP-glucose transporter [Arabidopsis
thaliana] GI:22651763
Length = 344
Score = 59.3 bits (137), Expect = 3e-09
Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Frame = +3
Query: 504 SLYITLVQFMITMLLSYGESWIRNPIKRKV-PLKTYAVLAALTLGTMSFSNLALSYLNYP 680
SL++ + T +S G + V P+ Y +++ + T + AL Y+++P
Sbjct: 55 SLFLVFCNRLTTSAVSAGALLASKKVLDPVAPVYKYCLISVTNILTTTCQYEALKYVSFP 114
Query: 681 TQLIFKSCKLIPVMIGSIIIMRKRYSFLDYVAAIVMCVGLTMFTL 815
Q + K K+IPVM+ +IM+K+Y DY+ A ++ +G ++F L
Sbjct: 115 VQTLAKCAKMIPVMVWGTLIMQKKYKGFDYLVAFLVTLGCSVFIL 159
>At3g46180.1 68416.m04997 UDP-galactose/UDP-glucose
transporter-related contains weak similarity to
UDP-galactose/UDP-glucose transporter (GI:22651763)
[Arabidopsis thaliana]
Length = 347
Score = 56.8 bits (131), Expect = 2e-08
Identities = 24/74 (32%), Positives = 45/74 (60%)
Frame = +3
Query: 594 PLKTYAVLAALTLGTMSFSNLALSYLNYPTQLIFKSCKLIPVMIGSIIIMRKRYSFLDYV 773
P+ Y +++ + T + AL Y+++P Q + K K+IPVM+ +IM+K+Y DY+
Sbjct: 87 PVYKYCLISVTNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMVWGTLIMQKKYRGFDYL 146
Query: 774 AAIVMCVGLTMFTL 815
A ++ +G ++F L
Sbjct: 147 VAFLVTLGCSVFIL 160
>At2g02810.1 68415.m00226 UDP-galactose/UDP-glucose transporter
contains transmembrane domains; identical to
UDP-galactose/UDP-glucose transporter (GI:22651763)
[Arabidopsis thaliana] similar to UGTrel1 (GI:1669564)
[Rattus rattus]; identical to cDNA
UDP-galactose/UDP-glucose transporter GI:22651762
Length = 332
Score = 51.6 bits (118), Expect = 6e-07
Identities = 21/58 (36%), Positives = 39/58 (67%)
Frame = +3
Query: 657 ALSYLNYPTQLIFKSCKLIPVMIGSIIIMRKRYSFLDYVAAIVMCVGLTMFTLADSST 830
AL Y++YP Q++ KS K+IPVM+ ++ RY+F +Y+ ++ G+++F L +S+
Sbjct: 102 ALKYISYPAQVLAKSSKMIPVMLMGTLVYGIRYTFPEYMCTFLVAGGVSIFALLKTSS 159
>At1g14360.1 68414.m01702 UDP-galactose/UDP-glucose transporter,
putative very similar to UDP-galactose/UDP-glucose
transporter (GI:22651763) {Arabidopsis thaliana}
Length = 331
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/58 (36%), Positives = 38/58 (65%)
Frame = +3
Query: 657 ALSYLNYPTQLIFKSCKLIPVMIGSIIIMRKRYSFLDYVAAIVMCVGLTMFTLADSST 830
AL Y++YP Q++ KS K+IPVM+ ++ RY+ +Y+ ++ G++MF L +S+
Sbjct: 102 ALKYISYPAQVLAKSSKMIPVMLMGSLVYGIRYTLPEYLCTFLVAGGVSMFALLKTSS 159
>At5g57100.1 68418.m07129 transporter-related low similarity to
GDP-fucose transporter [Caenorhabditis elegans]
GI:13940504, phosphoenolpyruvate/phosphate translocator
precursor [Mesembryanthemum crystallinum] GI:9295275
Length = 390
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/77 (25%), Positives = 39/77 (50%)
Frame = +3
Query: 591 VPLKTYAVLAALTLGTMSFSNLALSYLNYPTQLIFKSCKLIPVMIGSIIIMRKRYSFLDY 770
+PL T ++ +L+ G +N++L Y + + K ++ + RKR SF+
Sbjct: 130 LPLYTLGIVMSLSTG---LANVSLKYNSVGFYQMAKIAVTPSIVFAEFLWYRKRVSFMKV 186
Query: 771 VAAIVMCVGLTMFTLAD 821
V+ V+ VG+ + T+ D
Sbjct: 187 VSLTVVSVGVAVATVTD 203
>At1g77210.1 68414.m08993 sugar transporter, putative similar to
monosaccharide transporter PaMst-1 [Picea abies]
GI:2258137, sugar carrier protein GI:169735 from
[Ricinus communis], glucose transporter [Saccharum
hybrid cultivar H65-7052] GI:347855; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 504
Score = 32.7 bits (71), Expect = 0.31
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 423 SIFVFIFYLAYGYFLELIFAKPEVKPVSLYITLVQFMITMLLSYGESW 566
S+ +F + + G L L F + + P SL + LV + +L+YG SW
Sbjct: 358 SVEMFCYMVVVGVTLALKFGEGKELPKSLGLILVVLICLFVLAYGRSW 405
>At5g50630.1 68418.m06272 nodulin family protein similar to
nodulin-like protein [Arabidopsis thaliana] GI:3329368,
nodule-specific protein Nlj70 [Lotus japonicus]
GI:3329366
Length = 540
Score = 29.9 bits (64), Expect = 2.2
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Frame = +3
Query: 372 LCFDITNYSQLTQFLCC-SIFVFIFYLAYGYFLELIFAKPEVKPVSLYITLVQFMITM-L 545
+C+ + YS F+ SI F+ +A GYF ELI K + P +L +++VQ ++++ L
Sbjct: 350 ICYSL-GYSNTKIFVSLISISNFLGRVAGGYFSELIIRKLSL-PRTLAMSVVQAIMSLGL 407
Query: 546 LSYGESW 566
+ Y W
Sbjct: 408 IYYAIDW 414
>At5g50520.1 68418.m06257 nodulin family protein similar to
nodulin-like protein [Arabidopsis thaliana] GI:3329368,
nodule-specific protein Nlj70 [Lotus japonicus]
GI:3329366
Length = 540
Score = 29.9 bits (64), Expect = 2.2
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Frame = +3
Query: 372 LCFDITNYSQLTQFLCC-SIFVFIFYLAYGYFLELIFAKPEVKPVSLYITLVQFMITM-L 545
+C+ + YS F+ SI F+ +A GYF ELI K + P +L +++VQ ++++ L
Sbjct: 350 ICYSL-GYSNTKIFVSLISISNFLGRVAGGYFSELIIRKLSL-PRTLAMSVVQAIMSLGL 407
Query: 546 LSYGESW 566
+ Y W
Sbjct: 408 IYYAIDW 414
>At4g25190.1 68417.m03626 hypothetical protein contains Pfam
profile: PF04484 family of unknown function (DUF566)
Length = 443
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/67 (29%), Positives = 37/67 (55%)
Frame = +2
Query: 362 NQYIML*HNKLQSINSVPVLFDIRFYILFSLWILLRINICKTGSEASQFVYNLSAIYDYY 541
NQ ++ +S+ S+P LF + Y+L SL+I R +GS F+YNL+ ++
Sbjct: 382 NQELLYFEEMDESLLSIP-LFTVIHYLLISLYICDR-----SGS----FIYNLNGLFFIG 431
Query: 542 VVELWRI 562
+ +W++
Sbjct: 432 SIWMWKL 438
>At5g37180.1 68418.m04464 sucrose synthase, putative / sucrose-UDP
glucosyltransferase, putative similar to sucrose
synthase GI:6682841 from [Citrus unshiu]
Length = 836
Score = 28.3 bits (60), Expect = 6.6
Identities = 23/73 (31%), Positives = 35/73 (47%)
Frame = +2
Query: 425 DIRFYILFSLWILLRINICKTGSEASQFVYNLSAIYDYYVVELWRIMDKKSYQKESSTKN 604
D ++ +FS L RIN C T + V N+ + Y Y WR ++K QK + +
Sbjct: 728 DPDYWNMFSNEGLQRINECYTWKIYANKVINMGSTYSY-----WRHLNKD--QKLAKQRY 780
Query: 605 VCSFSCIDIRNNV 643
+ SF + RN V
Sbjct: 781 IHSFYNLQYRNLV 793
>At5g19310.1 68418.m02301 homeotic gene regulator, putative similar
to SP|P25439 Homeotic gene regulator (Brahma protein)
{Drosophila melanogaster}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain
Length = 1064
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/40 (25%), Positives = 23/40 (57%)
Frame = -3
Query: 379 KHNILISVFDVLLFSSSILMKVSFTEFILSDDVSITHHLC 260
K N+LI+ +D+++ + L K+ + I+ + + +H C
Sbjct: 484 KFNVLITHYDLIMRDKAFLKKIDWNYMIVDEGHRLKNHEC 523
>At3g59360.2 68416.m06620 nucleotide-sugar transporter family
protein low similarity to SP|P78382 CMP-sialic acid
transporter {Homo sapiens}; contains Pfam profile
PF04142: Nucleotide-sugar transporter
Length = 405
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/79 (22%), Positives = 39/79 (49%)
Frame = +3
Query: 570 RNPIKRKVPLKTYAVLAALTLGTMSFSNLALSYLNYPTQLIFKSCKLIPVMIGSIIIMRK 749
RN + VP YA+ L TM Y N T + + K++ + + ++M++
Sbjct: 117 RNNVLLAVPALLYAINNYLKF-TMQL------YFNPATVKMLSNLKVLVIAVLLKMVMKR 169
Query: 750 RYSFLDYVAAIVMCVGLTM 806
R+S + + A ++ +G+++
Sbjct: 170 RFSIIQWEALALLLIGISV 188
>At3g59360.1 68416.m06619 nucleotide-sugar transporter family
protein low similarity to SP|P78382 CMP-sialic acid
transporter {Homo sapiens}; contains Pfam profile
PF04142: Nucleotide-sugar transporter
Length = 405
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/79 (22%), Positives = 39/79 (49%)
Frame = +3
Query: 570 RNPIKRKVPLKTYAVLAALTLGTMSFSNLALSYLNYPTQLIFKSCKLIPVMIGSIIIMRK 749
RN + VP YA+ L TM Y N T + + K++ + + ++M++
Sbjct: 117 RNNVLLAVPALLYAINNYLKF-TMQL------YFNPATVKMLSNLKVLVIAVLLKMVMKR 169
Query: 750 RYSFLDYVAAIVMCVGLTM 806
R+S + + A ++ +G+++
Sbjct: 170 RFSIIQWEALALLLIGISV 188
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,400,479
Number of Sequences: 28952
Number of extensions: 296688
Number of successful extensions: 776
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 773
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1911862400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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