Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0453
         (673 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.7  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   2.3  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   3.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.2  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   9.2  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   9.2  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +2

Query: 227 VQVEASLYTLEDTFKLESMSDFF*NLNLISRGFRREATP 343
           + V AS + +ED F  + +      +NL +  F RE  P
Sbjct: 335 IAVPASRFRVEDGFNPQRLGSLVDFINLQAFDFHREREP 373


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -1

Query: 394 CNVFCSELGNTGPSPT 347
           C +FCSE     P PT
Sbjct: 53  CRLFCSEAAALWPKPT 68


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 339  PRDVGEGPVLPSSEQ 383
            PR  GE P++PS+E+
Sbjct: 1484 PRTRGEKPIVPSAEK 1498


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 622 IWLKGLISRSCISFHI 669
           IWL  L+S++ I+ HI
Sbjct: 466 IWLLWLLSQTWITLHI 481


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 622 IWLKGLISRSCISFHI 669
           IWL  L+S++ I+ HI
Sbjct: 466 IWLLWLLSQTWITLHI 481


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 622 IWLKGLISRSCISFHI 669
           IWL  L+S++ I+ HI
Sbjct: 466 IWLLWLLSQTWITLHI 481


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 622 IWLKGLISRSCISFHI 669
           IWL  L+S++ I+ HI
Sbjct: 466 IWLLWLLSQTWITLHI 481


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 185 MTCISRLRDC 214
           +TCI  LRDC
Sbjct: 49  LTCIEGLRDC 58


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 185 MTCISRLRDC 214
           +TCI  LRDC
Sbjct: 45  LTCIEGLRDC 54


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,234
Number of Sequences: 336
Number of extensions: 2809
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)