Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0453
         (673 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0718 + 5484553-5484601,5484836-5484933,5485028-5485078,548...    29   2.6  
02_04_0259 - 21345100-21345891,21347081-21347516,21347602-21348161     28   7.8  

>07_01_0718 +
           5484553-5484601,5484836-5484933,5485028-5485078,
           5485744-5485857,5485887-5485937,5485938-5486138,
           5486240-5486341,5486879-5486986,5487053-5487286,
           5488250-5488500,5488592-5488763,5489165-5489320,
           5489405-5489455,5489499-5489591,5489814-5490014,
           5490105-5490236,5490308-5490481,5490755-5490994,
           5491213-5491407
          Length = 890

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +1

Query: 361 RCCQVLSRTRYINH*GDVTKFSKINPSLSYYQTGPAFQ 474
           RCCQV+++  Y+ + GD   F+K+  +  ++ T   FQ
Sbjct: 46  RCCQVITKLLYLLNQGDT--FTKVEATEVFFATTKLFQ 81


>02_04_0259 - 21345100-21345891,21347081-21347516,21347602-21348161
          Length = 595

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +2

Query: 149 AVELGDTKRLICMTCISRLRDCV-AFRVQVEA 241
           A+ LGD+K +I      RL+DC    R+Q+EA
Sbjct: 174 ALTLGDSKEIIAQRLHDRLQDCPGGERLQIEA 205


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,591,875
Number of Sequences: 37544
Number of extensions: 288064
Number of successful extensions: 426
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 426
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)