BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0453 (673 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_01_0718 + 5484553-5484601,5484836-5484933,5485028-5485078,548... 29 2.6 02_04_0259 - 21345100-21345891,21347081-21347516,21347602-21348161 28 7.8 >07_01_0718 + 5484553-5484601,5484836-5484933,5485028-5485078, 5485744-5485857,5485887-5485937,5485938-5486138, 5486240-5486341,5486879-5486986,5487053-5487286, 5488250-5488500,5488592-5488763,5489165-5489320, 5489405-5489455,5489499-5489591,5489814-5490014, 5490105-5490236,5490308-5490481,5490755-5490994, 5491213-5491407 Length = 890 Score = 29.5 bits (63), Expect = 2.6 Identities = 13/38 (34%), Positives = 23/38 (60%) Frame = +1 Query: 361 RCCQVLSRTRYINH*GDVTKFSKINPSLSYYQTGPAFQ 474 RCCQV+++ Y+ + GD F+K+ + ++ T FQ Sbjct: 46 RCCQVITKLLYLLNQGDT--FTKVEATEVFFATTKLFQ 81 >02_04_0259 - 21345100-21345891,21347081-21347516,21347602-21348161 Length = 595 Score = 27.9 bits (59), Expect = 7.8 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%) Frame = +2 Query: 149 AVELGDTKRLICMTCISRLRDCV-AFRVQVEA 241 A+ LGD+K +I RL+DC R+Q+EA Sbjct: 174 ALTLGDSKEIIAQRLHDRLQDCPGGERLQIEA 205 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,591,875 Number of Sequences: 37544 Number of extensions: 288064 Number of successful extensions: 426 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 422 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 426 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1703141568 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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