Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0453
         (673 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL117193-7|CAB60301.2|  346|Caenorhabditis elegans Hypothetical ...    28   6.9  
AF038614-7|AAB92060.2|  664|Caenorhabditis elegans Hypothetical ...    28   6.9  
AC025721-10|AAK29908.2| 1019|Caenorhabditis elegans Hypothetical...    28   6.9  
Z82269-5|CAH60772.1|  618|Caenorhabditis elegans Hypothetical pr...    27   9.2  
Z82269-4|CAB70200.2|  633|Caenorhabditis elegans Hypothetical pr...    27   9.2  
AL021487-15|CAH60766.1|  618|Caenorhabditis elegans Hypothetical...    27   9.2  
AL021487-14|CAA16360.3|  633|Caenorhabditis elegans Hypothetical...    27   9.2  

>AL117193-7|CAB60301.2|  346|Caenorhabditis elegans Hypothetical
           protein Y105C5A.11 protein.
          Length = 346

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +2

Query: 374 F*AEHVTLTIKAMSLNSLKLIRVSLTIKPVQHFK 475
           F   H  L  K +S  ++   R++  I PVQHFK
Sbjct: 119 FLLNHYCLAFKTLSQIAISFNRMTCVIFPVQHFK 152


>AF038614-7|AAB92060.2|  664|Caenorhabditis elegans Hypothetical
           protein F15E6.9 protein.
          Length = 664

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
 Frame = +2

Query: 395 LTIKAMSLNSLKLIRVSLTIKPV-QHFKFCFL*QAHVITLEFYLFILIYYSLK*INLYHH 571
           L +  + LN  +  +V +T+  + Q+F  CF   A + +L   +FI  + + K    Y  
Sbjct: 340 LLVDDIHLNFCENFKVKITLSQILQNFN-CF---AQIFSLLKQIFINFFQASKEAQQYLI 395

Query: 572 ILPDVIFYITENKKKLRSGLKVSLVGHVFP 661
              +++   T  KKKL   +   ++ H+ P
Sbjct: 396 GNEELVIVATSRKKKLEVDMNRIIIPHLEP 425


>AC025721-10|AAK29908.2| 1019|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.1 protein.
          Length = 1019

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +2

Query: 524 FILIYYSLK*INLYHHILPDVIFYITE 604
           FILI   L  IN  +HI+P   FYI E
Sbjct: 566 FILIMQKLSLINKTYHIIPLETFYIDE 592


>Z82269-5|CAH60772.1|  618|Caenorhabditis elegans Hypothetical
           protein Y45F10B.13b protein.
          Length = 618

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = -2

Query: 291 KSDILSNLNVSSRVYKEAST*TLKATQSRNLDMQVMHINLLVSPSS 154
           KSDI+  L    RV +E S+   + TQS + DM     N +V  +S
Sbjct: 290 KSDIMDELEEHQRVRQERSSVNREMTQSCHPDMAQWKANEVVDRAS 335


>Z82269-4|CAB70200.2|  633|Caenorhabditis elegans Hypothetical
           protein Y45F10B.13a protein.
          Length = 633

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = -2

Query: 291 KSDILSNLNVSSRVYKEAST*TLKATQSRNLDMQVMHINLLVSPSS 154
           KSDI+  L    RV +E S+   + TQS + DM     N +V  +S
Sbjct: 305 KSDIMDELEEHQRVRQERSSVNREMTQSCHPDMAQWKANEVVDRAS 350


>AL021487-15|CAH60766.1|  618|Caenorhabditis elegans Hypothetical
           protein Y45F10B.13b protein.
          Length = 618

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = -2

Query: 291 KSDILSNLNVSSRVYKEAST*TLKATQSRNLDMQVMHINLLVSPSS 154
           KSDI+  L    RV +E S+   + TQS + DM     N +V  +S
Sbjct: 290 KSDIMDELEEHQRVRQERSSVNREMTQSCHPDMAQWKANEVVDRAS 335


>AL021487-14|CAA16360.3|  633|Caenorhabditis elegans Hypothetical
           protein Y45F10B.13a protein.
          Length = 633

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = -2

Query: 291 KSDILSNLNVSSRVYKEAST*TLKATQSRNLDMQVMHINLLVSPSS 154
           KSDI+  L    RV +E S+   + TQS + DM     N +V  +S
Sbjct: 305 KSDIMDELEEHQRVRQERSSVNREMTQSCHPDMAQWKANEVVDRAS 350


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,857,697
Number of Sequences: 27780
Number of extensions: 264560
Number of successful extensions: 522
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 522
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)