BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0451 (724 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_02_0764 + 10990220-10992410,10992809-10993616,10994734-109949... 33 0.23 06_03_1348 - 29497084-29497384,29497464-29497634,29497717-294985... 29 3.7 02_05_1120 + 34257504-34258294,34258483-34258571,34258616-342587... 28 6.5 02_03_0337 + 17898732-17899370,17899516-17899977,17900058-179006... 28 6.5 >03_02_0764 + 10990220-10992410,10992809-10993616,10994734-10994968, 10995028-10995169,10997365-10997444,10997636-10997776 Length = 1198 Score = 33.1 bits (72), Expect = 0.23 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Frame = +2 Query: 323 GSTEFWVYPSQQMFW-NAMLRKGWRWKDEDIKPKDMDDIIRIHNANNEQAWQEVLKWEAL 499 G ++ PS +FW + K +W P+D DD R+H ++ +A+ EV+K +L Sbjct: 547 GMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSL 606 >06_03_1348 - 29497084-29497384,29497464-29497634,29497717-29498549, 29498631-29499092,29499171-29499904,29499993-29500122 Length = 876 Score = 29.1 bits (62), Expect = 3.7 Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 5/72 (6%) Frame = +2 Query: 431 DIIRIHNANNEQAWQEVLKWEALHAKECGHPRLKSFG--GKATQYSPRAVIRSWL---GY 595 DI ++ A E+AW + KW A+E + K+F GKA + + ++ G Sbjct: 116 DIGKVTEAEKERAWTAMEKWFTFPAEEKDRLKWKAFQKMGKAWKNWKSKLFTEYVNPPGN 175 Query: 596 ELPFDRHDWIVD 631 PFD + I + Sbjct: 176 HTPFDEYPQITE 187 >02_05_1120 + 34257504-34258294,34258483-34258571,34258616-34258713, 34259269-34259292,34259314-34259404,34259761-34259813, 34259933-34260151 Length = 454 Score = 28.3 bits (60), Expect = 6.5 Identities = 19/68 (27%), Positives = 28/68 (41%) Frame = +2 Query: 131 PPPECPMHNKTEQKPKVSECPVQHGNDINPFXXXXXXXXXXXXDQPFTLPTNRQVSSIPR 310 PPP P +++ + PK SE G NP P LP +R++ + P Sbjct: 31 PPPPPPPNDRDDASPKPSE-----GEGRNPAASLFQDLRDRLMSTPSHLP-SRRIPTAPP 84 Query: 311 AMPDGSTE 334 P G+ E Sbjct: 85 PRPSGNAE 92 >02_03_0337 + 17898732-17899370,17899516-17899977,17900058-17900688, 17900819-17900888,17900971-17901141,17901221-17901479, 17901918-17901956,17902900-17902914 Length = 761 Score = 28.3 bits (60), Expect = 6.5 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 5/72 (6%) Frame = +2 Query: 431 DIIRIHNANNEQAWQEVLKWEALHAKECGHPRLKSFG--GKATQYSPRAVIRSWL---GY 595 DI ++ A E+AW + KW AK + K+F GKA + + ++ G Sbjct: 64 DIDKVTKAEKERAWTAMEKWFTFPAKAKDRLKRKAFHKMGKAWKNWKSKLFTEFVNLPGN 123 Query: 596 ELPFDRHDWIVD 631 PFD + I + Sbjct: 124 HTPFDEYPQITE 135 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 21,427,361 Number of Sequences: 37544 Number of extensions: 500619 Number of successful extensions: 1292 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1253 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1292 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1886372480 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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