Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0451
(724 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11652| Best HMM Match : No HMM Matches (HMM E-Value=.) 198 5e-51
SB_6818| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_51818| Best HMM Match : Cu2_monooxygen (HMM E-Value=2.8e-14) 30 1.7
SB_36998| Best HMM Match : TUDOR (HMM E-Value=0) 29 2.9
SB_21624| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_6177| Best HMM Match : PDE6_gamma (HMM E-Value=1.6) 29 5.0
SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_38471| Best HMM Match : Krr1 (HMM E-Value=4.7) 28 6.7
SB_19938| Best HMM Match : TolA (HMM E-Value=0.22) 28 8.8
SB_8305| Best HMM Match : Plasmodium_HRP (HMM E-Value=8.8) 28 8.8
SB_31159| Best HMM Match : Pox_C7_F8A (HMM E-Value=1.2) 28 8.8
SB_28361| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 28 8.8
SB_27160| Best HMM Match : GtrA (HMM E-Value=9.3) 28 8.8
SB_16461| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
>SB_11652| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 238
Score = 198 bits (482), Expect = 5e-51
Identities = 86/128 (67%), Positives = 103/128 (80%), Gaps = 2/128 (1%)
Frame = +2
Query: 347 PSQQMFWNAMLRKGWRWKDEDIKPKDMDDIIRIHNANNEQAWQEVLKWEALHAKECGHPR 526
P+ MFWNAM+RKGW+W+ +D+ PKDM II+IHNANNE+AWQE+LKWEALHAKEC +P+
Sbjct: 72 PTNMMFWNAMVRKGWKWEKDDLNPKDMGHIIKIHNANNERAWQEILKWEALHAKECRNPK 131
Query: 527 LKSFGGKATQYSPRAVIRSWLGYELPFDRHDWIVDRCGKDVRYIIDYYHGGEVD--NKYQ 700
L SF G+A ++ RA IRS LGYELPFDRHDWIVDRCG+ VRYIIDYY G+ D +
Sbjct: 132 LISFKGRAQDFTIRARIRSLLGYELPFDRHDWIVDRCGRHVRYIIDYYDVGDEDAYKTGE 191
Query: 701 FAMLDVRP 724
F LDVRP
Sbjct: 192 FVELDVRP 199
>SB_6818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1784
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 591 GMSYHSTVMTGLWTDVGRTCAISLII 668
G +Y TV TG+W D G T + L I
Sbjct: 1179 GFAYQITVQTGMWRDYGTTANVGLSI 1204
>SB_51818| Best HMM Match : Cu2_monooxygen (HMM E-Value=2.8e-14)
Length = 239
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +2
Query: 542 GKATQYSPRAVIRSWLGYELPFDRHDWIVDRCGKD--VRYIIDYYHGGEVDNKYQFAMLD 715
G Q S + ++ +W G D + + + G+D V+Y++ H G VD ++ M
Sbjct: 143 GVCAQGSAKKILYAWAGNAPSLDLPEGVAFKVGQDSDVKYLVLQVHYGHVDKFFRTVMTG 202
Query: 716 VR 721
R
Sbjct: 203 YR 204
>SB_36998| Best HMM Match : TUDOR (HMM E-Value=0)
Length = 2538
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +2
Query: 74 NKVSAEAHVNIKIGEKDVNPPPECPMHNKTEQKPKVSECPV 196
N+V A+ + +++ E+D + P ++N +KP + E P+
Sbjct: 2173 NEVCADGTIEVEVVEQDPSGCPSVRLYNSETKKPIIPEDPI 2213
>SB_21624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/45 (26%), Positives = 27/45 (60%)
Frame = +3
Query: 549 RLNIVLEPLYVLGLGMSYHSTVMTGLWTDVGRTCAISLIITTVVK 683
+LN+V+ +V G+ H+ ++T + D+G ++LI+T + +
Sbjct: 95 KLNLVITNQFVDIGGLGEHNPIITNQFVDIGGLGKLTLIVTNLCR 139
>SB_6177| Best HMM Match : PDE6_gamma (HMM E-Value=1.6)
Length = 642
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +2
Query: 524 RLKSFGGKATQYSPRAVIRSWLGYELPFDRHDWIVDRCG 640
R++ F KA + P+ SW G + DW++ + G
Sbjct: 558 RVRQFRSKAWKLEPKVRFLSWAGKNMDPVNMDWVLQKLG 596
>SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3474
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +3
Query: 597 SYHSTVMTGLWTDVGRTCAISLIITTVVKSITNISLQ 707
+YH+ V TG+W + G T + +++ +S I L+
Sbjct: 2144 TYHTWVTTGIWRNAGTTANVFIVLNGEKQSSRPIHLR 2180
>SB_38471| Best HMM Match : Krr1 (HMM E-Value=4.7)
Length = 536
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 424 VFWFYILIFPTPAFTQHSIPKHLLTWINPEFS 329
V W ++L++ P + S PKHL T +P FS
Sbjct: 465 VSW-HVLLYVKPGEMEWSTPKHLSTSFHPAFS 495
>SB_19938| Best HMM Match : TolA (HMM E-Value=0.22)
Length = 2279
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 479 VLKWEALHAKECGHPRLKSFGGKATQYSPRAVIRSWLGYEL 601
+L+++ L + C R SF G + + SPR + S L YEL
Sbjct: 1975 LLEFKTLRSVGCYIRRFVSFNGFSDETSPRPLDDSQLSYEL 2015
>SB_8305| Best HMM Match : Plasmodium_HRP (HMM E-Value=8.8)
Length = 366
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -3
Query: 716 HPTLQTDICYRLHHRGNNQ*YSARPSHICPQSSHDGRMVTHTQAKN 579
+PT QT + H++ NNQ HI P ++++ THT +N
Sbjct: 120 NPTTQTTKRHIQHNKTNNQTTHTTQQHIQPNNTNN--QTTHTTQQN 163
>SB_31159| Best HMM Match : Pox_C7_F8A (HMM E-Value=1.2)
Length = 429
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +2
Query: 374 MLRKGWRWKDEDIKPKDMDDIIRIHNANNE 463
+ K RW+D+D++ + +D+ +IHN +
Sbjct: 127 LTEKHVRWEDQDLESEKLDENDKIHNVEEK 156
>SB_28361| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 551
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -2
Query: 57 YVSLQKRRRSKLTEH 13
Y+ LQ+RRRSK TEH
Sbjct: 302 YLYLQRRRRSKFTEH 316
>SB_27160| Best HMM Match : GtrA (HMM E-Value=9.3)
Length = 398
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +3
Query: 549 RLNIVLEPLYVLGLGMSYHSTVMTGLWTDVGRTCAISLIIT 671
+LN+++ +V G+ H+ V+T + D+G ++L+IT
Sbjct: 188 KLNLIITNQFVDIGGLGEHNLVITNQFVDIGGLGKLNLVIT 228
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 552 LNIVLEPLYVLGLGMSYHSTVMTGLWTDVGRTCAISLIIT 671
LN+V+ +V G+ H+ V+T + D+G ++LIIT
Sbjct: 240 LNLVITNQFVDIGGLGEHNLVITNQFVDIGGLGELNLIIT 279
>SB_16461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 173
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = -1
Query: 244 VSRRHHVEWIDIISMLY---WTFRNLWLL-LRFVMHRALRWRIHI 122
VS +HV W++ + LY W + WL + ++ H +RW H+
Sbjct: 12 VSWLYHVRWLNYVRWLYHVRWLYHVRWLYHVSWLYH--VRWLYHV 54
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,377,980
Number of Sequences: 59808
Number of extensions: 553315
Number of successful extensions: 1447
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1444
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1925890720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -