Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0450
(764 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0820 + 27951971-27954236,27954746-27955008,27955169-279552... 33 0.19
12_01_0694 - 5923836-5924450 32 0.44
01_06_1354 - 36599904-36600643,36600851-36601352 31 0.76
09_04_0115 - 14789499-14790288,14792055-14792441,14792820-14793193 31 1.0
10_07_0019 + 11931519-11932310 31 1.3
10_01_0026 - 351737-353443 30 1.8
01_01_0082 + 625198-625719 30 2.3
02_04_0468 - 23172561-23174201 29 3.1
06_01_1061 + 8562039-8562485 29 4.1
03_02_0149 + 5933134-5933207,5935039-5935267,5935370-5935468,593... 29 4.1
11_06_0610 - 25449085-25453284 29 5.4
06_03_1146 - 28004896-28005554,28005664-28005844 29 5.4
02_01_0311 - 2075881-2076165,2076450-2076519,2076628-2076691,207... 29 5.4
12_01_0710 - 6155357-6155708,6156354-6156604,6158874-6158987 28 7.1
10_08_0425 - 17806117-17806401,17806862-17806984,17807076-178072... 28 7.1
07_03_1626 + 28223967-28225294,28225506-28225779,28225939-282262... 28 7.1
05_05_0075 + 22209322-22210041,22210323-22210391,22210775-222111... 28 7.1
02_01_0706 + 5270233-5270326,5270767-5270914,5271018-5271089,527... 28 7.1
01_01_0218 + 1856104-1856700,1856814-1857452 28 7.1
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 28 9.4
09_04_0032 - 13953323-13955269 28 9.4
05_05_0155 + 22787658-22787930,22788029-22788096,22789600-227899... 28 9.4
04_04_0016 - 22167780-22167873,22167978-22168272,22168380-221684... 28 9.4
03_06_0613 - 35090377-35090478,35090686-35090839,35090925-350910... 28 9.4
03_05_0576 + 25765137-25766420 28 9.4
01_06_0090 + 26358051-26359157,26359582-26359701,26359968-263600... 28 9.4
>03_05_0820 +
27951971-27954236,27954746-27955008,27955169-27955288,
27957790-27957856,27958310-27958515
Length = 973
Score = 33.5 bits (73), Expect = 0.19
Identities = 22/70 (31%), Positives = 30/70 (42%)
Frame = -1
Query: 368 RPSPMPST*CGPPPSASNDFPPCALSRQSTGLEDAPRSLYPSVASIRGLSPPPGVAGSTD 189
RP P P PPP S + P +T L ++ +S +A+ L+P P S
Sbjct: 9 RPPPQPLPRRPPPPKPSAESKPAKARAPATSLLESLKSFKSRLAAGPPLAPTPKSFKSYA 68
Query: 188 VYCPYILVLC 159
C IL LC
Sbjct: 69 ETCASILRLC 78
>12_01_0694 - 5923836-5924450
Length = 204
Score = 32.3 bits (70), Expect = 0.44
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Frame = +1
Query: 178 GQYTSVEPATPGGGESPRMEA---TDGYKERGASSNPVD*RLSAHGGKSLDAEGG----G 336
G + EP + GGG R +A DG G + R GG+ DAEGG G
Sbjct: 52 GWWWRSEPTSRGGGRGDRRDAGDEEDGEAGAGDGGLRTNQRAGRGGGRRGDAEGGDGAAG 111
Query: 337 PHYVEGIG 360
PH + G
Sbjct: 112 PHLSDAAG 119
>01_06_1354 - 36599904-36600643,36600851-36601352
Length = 413
Score = 31.5 bits (68), Expect = 0.76
Identities = 21/68 (30%), Positives = 29/68 (42%)
Frame = -1
Query: 380 TAGHRPSPMPST*CGPPPSASNDFPPCALSRQSTGLEDAPRSLYPSVASIRGLSPPPGVA 201
TA P P P+ PP + S P +++ ++ G P P +S SPP V
Sbjct: 5 TAASPPPPPPN----PPAADSTHSSPASMTDETHGAGAHPDESQPHRSSSSSSSPPVAVD 60
Query: 200 GSTDVYCP 177
G T V P
Sbjct: 61 GETRVPLP 68
>09_04_0115 - 14789499-14790288,14792055-14792441,14792820-14793193
Length = 516
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/68 (29%), Positives = 29/68 (42%)
Frame = -1
Query: 380 TAGHRPSPMPST*CGPPPSASNDFPPCALSRQSTGLEDAPRSLYPSVASIRGLSPPPGVA 201
T G P+ P T P+AS A + S + + P S + A+I G SP P +
Sbjct: 50 TLGASPAAAPPTGPASSPAASPALQTSAAAAASLVVVEPPASPTSAAATILGASPAPALP 109
Query: 200 GSTDVYCP 177
S + P
Sbjct: 110 TSPETSIP 117
>10_07_0019 + 11931519-11932310
Length = 263
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
Frame = +1
Query: 196 EPATPGGGESPRMEATDGYK-ERGASSNPV--D*RLSAHGGKSLDAEGG----GPHYVEG 354
EP + GGG R +A D E GA + + R+ GG+ DAEGG GPH
Sbjct: 48 EPTSRGGGWGGRRDAGDEEDGEPGAGDGGLWTNQRVGRGGGRRGDAEGGDGAAGPHLSGA 107
Query: 355 IGE 363
GE
Sbjct: 108 AGE 110
>10_01_0026 - 351737-353443
Length = 568
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = -1
Query: 383 PTAGHRPSPMPST*CGPPPSASNDFPPCALSRQSTGLEDAPRSLYPSVASIRGLSPPPGV 204
P++ SP P + PPP AS + PP + S+ + P S S ++ +P
Sbjct: 22 PSSSLSKSPSPPSPSSPPPPASTNAPPKSAGGVSSSTQAQPSSESSSESTTTPSAPAERK 81
Query: 203 AGST 192
+G +
Sbjct: 82 SGGS 85
>01_01_0082 + 625198-625719
Length = 173
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/57 (26%), Positives = 20/57 (35%)
Frame = -1
Query: 383 PTAGHRPSPMPST*CGPPPSASNDFPPCALSRQSTGLEDAPRSLYPSVASIRGLSPP 213
P + P PST C PPP + P + G P + L+PP
Sbjct: 79 PPVAYPPPTTPSTNCPPPPYGGGGYNPTPSYNPTPGYNPTPSGWFTPPNMPSYLTPP 135
>02_04_0468 - 23172561-23174201
Length = 546
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 251 TRSVGRPPTRWTDDLVRTAGSRWMR 325
T ++GR P W DD RWMR
Sbjct: 409 TYAIGRDPASWGDDAAAFRPERWMR 433
>06_01_1061 + 8562039-8562485
Length = 148
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 7/56 (12%)
Frame = +1
Query: 196 EPATPGGGESPRMEA---TDGYKERGASSNPVD*RLSAHGGKSLDAEGG----GPH 342
EP + GGG R + DG G + R+ GG+ DAEGG GPH
Sbjct: 51 EPTSRGGGRGGRRDVGDEEDGEAGAGDGGLRTNQRVGQGGGRRGDAEGGDGAAGPH 106
>03_02_0149 +
5933134-5933207,5935039-5935267,5935370-5935468,
5935582-5935616,5935694-5935769,5936552-5936662,
5937001-5937087,5937302-5937395,5937489-5937606,
5938047-5938542,5939263-5939298,5940047-5940578,
5940668-5940792
Length = 703
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = -1
Query: 365 PSPMPST*CGPPPSASNDFPPCALSRQSTGLEDAPRSLYPSVASIRGLSPPP 210
P P P PPP + PP S + + ED L +A + + PPP
Sbjct: 544 PPPPPRNMLPPPPKSMPPPPPKFPSNEMSRNEDRCADLNKPMAPPKSMPPPP 595
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/58 (31%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Frame = -1
Query: 383 PTAGHRPSPMPST*CGPPPSASNDFPPCALSRQSTGLEDAPRSLYPSVA-SIRGLSPP 213
P H SP P PPP A PP +P +L P ++ G SPP
Sbjct: 842 PPEAHVSSPPPEKSSSPPPEAHVSSPPPPEKSPPPPETKSPPTLTPEISPPPEGKSPP 899
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = -2
Query: 349 PHNAVLRLPHPTTSRRAH*VVS--PPGWRT--PHAPCTHPWPPFEDFPP 215
PH V+ P PT S V+ PP ++ PH P + P P + +PP
Sbjct: 1049 PHAPVISEPPPTKSSPPQVPVTSEPPPAKSSPPHEPISPPETPEKSYPP 1097
>06_03_1146 - 28004896-28005554,28005664-28005844
Length = 279
Score = 28.7 bits (61), Expect = 5.4
Identities = 22/58 (37%), Positives = 25/58 (43%)
Frame = -1
Query: 374 GHRPSPMPST*CGPPPSASNDFPPCALSRQSTGLEDAPRSLYPSVASIRGLSPPPGVA 201
G R +P PS PPP A P A S S A SL PS + SP P V+
Sbjct: 136 GGRHAPPPSPPAVPPPVAPVPMPSPASSPPSPAPAAATPSLAPSPVATTP-SPSPSVS 192
>02_01_0311 -
2075881-2076165,2076450-2076519,2076628-2076691,
2076798-2076837,2076930-2077006,2077095-2077311,
2077482-2078132
Length = 467
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +2
Query: 131 IGDYSPQSVNT-IQVCKDNIHLSSQRRQVGGKVLEWRPRMGTRSVGRPPTRWTDDL 295
I D PQ ++ + C D L R ++ R GT S +P RWT +L
Sbjct: 219 IYDRPPQLMSLPVSSCSDQEDLQDARSPAKVQLSSSRSSSGTASCNKPRLRWTPEL 274
>12_01_0710 - 6155357-6155708,6156354-6156604,6158874-6158987
Length = 238
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 237 LHSRTFPPTWRRWLDRCILSLHT 169
L R FPP WR WL +LS T
Sbjct: 37 LQQRAFPPRWRNWLG-ALLSTST 58
>10_08_0425 -
17806117-17806401,17806862-17806984,17807076-17807222,
17807307-17807450,17808557-17808668,17808762-17808898,
17809016-17809156,17810921-17811004,17811275-17811742,
17811858-17811936,17812494-17812506,17813884-17814460,
17814502-17814774,17814899-17815045,17815354-17815413,
17816124-17816510
Length = 1058
Score = 28.3 bits (60), Expect = 7.1
Identities = 24/79 (30%), Positives = 31/79 (39%), Gaps = 4/79 (5%)
Frame = -2
Query: 301 AH*VVSPPGWRTPHAPCTHPWPPFEDFPPH-LASLARQMY---IVLTYLYCVYRLRTIIT 134
AH V P W P P PPF+ +P L L R M V YL + T
Sbjct: 404 AHGVQPQPLWGYPPQPTGFQQPPFQSYPSGLLGPLGRPMVGSSSVTAYLPSIQPPGVSTT 463
Query: 133 NQSSRNRSMKLNNSETVSR 77
++ S+ S SE +R
Sbjct: 464 DRDSKELSSANPGSEQPTR 482
>07_03_1626 +
28223967-28225294,28225506-28225779,28225939-28226230,
28226492-28226651,28226809-28226917,28227004-28227099
Length = 752
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 260 VGRPPTRWTDDLVRTAGSRWMRKAEDRIMWKALG 361
VG WTD+ +T S+ M +D + W G
Sbjct: 719 VGEMEMVWTDEPSKTRSSKTMNSKDDSVRWPEFG 752
>05_05_0075 +
22209322-22210041,22210323-22210391,22210775-22211145,
22212291-22212351,22212496-22213086
Length = 603
Score = 28.3 bits (60), Expect = 7.1
Identities = 19/63 (30%), Positives = 24/63 (38%)
Frame = -1
Query: 365 PSPMPST*CGPPPSASNDFPPCALSRQSTGLEDAPRSLYPSVASIRGLSPPPGVAGSTDV 186
P P+ PPP S PP S S+ +P S + A + PPG A S
Sbjct: 51 PPDHPAESPPPPPPGSWPLPPAFYSYASSSSSYSPHSPTLAHAQLVAHGMPPGAATSGGA 110
Query: 185 YCP 177
P
Sbjct: 111 QIP 113
>02_01_0706 +
5270233-5270326,5270767-5270914,5271018-5271089,
5271153-5271263,5271363-5271434,5271533-5271604,
5272126-5272197,5272281-5272346,5272426-5272491,
5272601-5272971,5273203-5273456,5273886-5274157,
5274333-5274474,5275174-5275313,5275381-5275537,
5275797-5275965,5276048-5276088
Length = 772
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -2
Query: 319 PTTSRRAH*VVSPPGWRTPHAPCTHPWPPFEDFPP 215
P+ +R AH SPP TPH P + P PP PP
Sbjct: 273 PSFTRSAH---SPP---TPHPPPSSPPPPMSPPPP 301
>01_01_0218 + 1856104-1856700,1856814-1857452
Length = 411
Score = 28.3 bits (60), Expect = 7.1
Identities = 21/63 (33%), Positives = 26/63 (41%)
Frame = -1
Query: 440 LLTNLLVFXXXXXXISLYLPTAGHRPSPMPST*CGPPPSASNDFPPCALSRQSTGLEDAP 261
LL+ +L+ S +PT PSP P T C PPS + P A T AP
Sbjct: 43 LLSPMLLSVSSLAPSSTPMPTPT-APSPSPETPCVWPPSPPSPTDPSASMPSPTERPAAP 101
Query: 260 RSL 252
L
Sbjct: 102 MGL 104
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 27.9 bits (59), Expect = 9.4
Identities = 19/70 (27%), Positives = 27/70 (38%)
Frame = -1
Query: 383 PTAGHRPSPMPST*CGPPPSASNDFPPCALSRQSTGLEDAPRSLYPSVASIRGLSPPPGV 204
PT + P P PPP S PP +++ + +P + PS I PP +
Sbjct: 397 PTFTYSSPPPPPLYYPPPPDISPS-PPPSVTPLPPVVYPSPPEVTPSPPEIAPYPSPPEI 455
Query: 203 AGSTDVYCPY 174
S PY
Sbjct: 456 VPSPPEITPY 465
>09_04_0032 - 13953323-13955269
Length = 648
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -1
Query: 380 TAGHRPSPMPST*CGPPPSASNDFPPCALS 291
T+ PSP PS PPP+AS D LS
Sbjct: 234 TSPPSPSPSPSPPIPPPPAASQDSKSSKLS 263
>05_05_0155 +
22787658-22787930,22788029-22788096,22789600-22789915,
22790207-22790323
Length = 257
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -2
Query: 325 PHPTTSRRAH*VVSPPGWRTPHAPCTHPWPPFEDFPPH 212
PHP H PP PH P HP PP PPH
Sbjct: 43 PHPPHHHPPH-HPHPP--HHPHPP-HHPHPPHHPHPPH 76
>04_04_0016 -
22167780-22167873,22167978-22168272,22168380-22168455,
22168665-22168853,22168955-22169176,22169315-22169413,
22169502-22169582,22169753-22170060,22171611-22171950,
22172047-22172110,22172191-22172412,22172865-22173043
Length = 722
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 194 TDVYCPYILVLCLQIEDYNHQSIIKKSINET**FRDRLTEILRYFLR 54
T VY + +VL + I+K S E FRDR+T+++RY R
Sbjct: 287 TVVYISFSIVLSAYLIGNMTALIVKGSRTER--FRDRMTDLIRYMNR 331
>03_06_0613 -
35090377-35090478,35090686-35090839,35090925-35091004,
35091191-35091340,35091920-35092045,35096500-35096916
Length = 342
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +3
Query: 303 RREV-VGCGRRRTALCGRHWGRPMSSSGQIK 392
RR + GC + + +L G W +P+ SSG+IK
Sbjct: 292 RRHIRTGCAKGQESLVG--WAKPLLSSGEIK 320
>03_05_0576 + 25765137-25766420
Length = 427
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/62 (29%), Positives = 22/62 (35%)
Frame = -1
Query: 383 PTAGHRPSPMPST*CGPPPSASNDFPPCALSRQSTGLEDAPRSLYPSVASIRGLSPPPGV 204
P+ PSP P PP PP A S + PR P V ++ P V
Sbjct: 69 PSPSPSPSPSPPPQPSSPPPPPPSPPPAAAVSVSPPTQPRPRPELPPVEAVLRRQPKGRV 128
Query: 203 AG 198
G
Sbjct: 129 FG 130
>01_06_0090 +
26358051-26359157,26359582-26359701,26359968-26360099,
26360194-26360375,26360488-26360602,26362001-26362135,
26362261-26362395
Length = 641
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -1
Query: 356 MPST*CGPPPSASNDFPPCALSRQSTGLEDAPRSLYPSVASIRGLSPPP 210
+PST P PS+S P S S+ PR+ P ++ + + PPP
Sbjct: 230 LPST-SAPSPSSSTSTSP-TYSCSSSDTVTTPRNRKPELSKLPPIPPPP 276
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,528,236
Number of Sequences: 37544
Number of extensions: 482604
Number of successful extensions: 2025
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1999
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -